Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 2.1e-191 672.2 336 100.0
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.1e-174 616.7 336 91.7
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.9e-172 608.6 336 90.2
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 2.3e-169 599.0 332 90.7
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 6.7e-169 597.4 334 89.5
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 3.3e-168 595.1 320 92.2
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 1.6e-167 592.8 336 88.7
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 2.1e-167 592.4 318 92.5
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 9.9e-165 583.6 332 88.3
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 4.3e-152 541.6 328 82.0
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.8e-137 493.0 318 76.7
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 3.0e-137 492.3 335 73.4
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 3.7e-135 485.3 331 74.0
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.0e-133 479.6 318 75.2
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 3.5e-133 478.8 337 73.9
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 5.9e-133 478.0 318 75.8
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 2.5e-131 472.6 319 74.0
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 4.2e-131 471.9 331 71.9
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 5.5e-131 471.5 331 72.2
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 9.4e-131 470.7 321 73.5
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 2.1e-130 469.5 338 70.7
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 2.7e-130 469.2 319 73.0
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 2.7e-130 469.2 318 75.8
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.7e-130 469.2 323 72.4
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.7e-130 468.4 340 70.6
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 6.1e-130 468.0 330 72.4
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 6.1e-130 468.0 330 73.6
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 8.0e-130 467.6 340 70.6
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.0e-129 467.2 341 71.3
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 1.0e-129 467.2 331 71.0
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 2.3e-129 466.1 341 71.8
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 3.0e-129 465.7 322 72.4
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 5.2e-129 464.9 328 69.8
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 5.2e-129 464.9 331 71.0
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 5.2e-129 464.9 331 71.0
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.5e-128 463.4 337 70.6
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.0e-128 463.0 331 71.0
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.0e-128 463.0 323 72.4
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.6e-128 462.6 338 69.5
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 5.7e-128 461.5 331 70.7
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 5.7e-128 461.5 323 73.1
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 7.4e-128 461.1 315 73.0
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 7.4e-128 461.1 330 72.4
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 7.4e-128 461.1 342 69.9
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 7.4e-128 461.1 320 74.1
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 7.4e-128 461.1 322 73.6
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 9.7e-128 460.7 320 73.8
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.3e-127 460.3 333 71.2
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-127 459.5 337 70.3
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-127 459.5 337 70.3
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 6.3e-127 458.0 339 69.0
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.2e-125 453.8 341 68.9
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 2.6e-125 452.6 337 69.7
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.9e-125 451.4 337 69.7
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.3e-124 450.3 332 69.0
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.7e-124 449.9 320 70.9
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 2.9e-124 449.1 336 68.8
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 5.0e-124 448.4 317 71.0
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 8.5e-124 447.6 340 69.1
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 8.5e-124 447.6 346 68.2
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.5e-123 446.8 322 69.3
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 4.2e-123 445.3 318 70.4
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 5.5e-123 444.9 320 71.2
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 9.4e-123 444.1 319 69.9
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.2e-122 443.7 329 69.6
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 3.6e-122 442.2 317 71.3
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.8e-121 439.9 318 69.8
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 8.8e-121 437.6 336 67.0
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 8.8e-121 437.6 337 66.5
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.7e-116 423.3 310 68.4
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 2.2e-116 422.9 308 69.8
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.2e-116 422.9 315 70.8
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.8e-116 422.2 326 66.9
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 8.5e-116 421.0 340 65.6
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.4e-113 413.7 322 67.7
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 5.7e-112 408.3 319 67.1
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.1e-110 404.1 277 72.9
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 9.1e-110 401.0 277 72.2
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 6.6e-108 394.8 318 63.5
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.9e-107 393.3 316 65.2
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.9e-107 393.3 322 64.6
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.9e-107 393.3 321 65.4
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.3e-103 380.6 347 60.2
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 1.0e-100 370.9 390 55.4
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.7e-100 370.2 331 61.0
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 6.6e-100 368.2 420 50.2
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.4e-97 360.5 354 57.3
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 6.8e-97 358.2 270 68.9
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 6.8e-97 358.2 316 60.8
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.2e-96 357.5 336 56.8
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 4.9e-95 352.1 368 54.6
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.1e-90 336.7 316 54.4
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.6e-85 320.5 317 54.3
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 6.2e-82 308.5 315 51.7
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.2e-77 294.3 206 69.9
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 5.2e-73 278.9 233 62.7
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 6.6e-68 261.9 294 49.0
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.7e-63 247.3 268 50.7
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 4.3e-59 232.6 164 74.4
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.9e-51 207.2 351 38.2
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 3.3e-51 206.5 308 38.6
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.7e-45 186.8 187 55.6
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.6e-45 186.0 178 53.9
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 8.4e-39 165.2 117 65.8
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.3e-38 161.8 104 75.0
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 6.7e-36 155.6 114 67.5
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 3.3e-19 100.1 227 35.7
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 2.3e-12 77.4 76 56.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 4.4e-11 73.2 50 66.0
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 2.9e-07 60.5 51 52.9
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 7.2e-06 55.8 83 45.8


User provided reference genes

Program Settings