Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0014181 Lotus japonicus HOM05D004631 ORTHO05D005223 6.6e-137 490.7 251 100.0
Ca_04405_v3 Cicer arietinum L. HOM05D004631 ORTHO05D005223 3.4e-93 345.5 245 75.1
TPR.G29003 Trifolium pratense HOM05D004631 ORTHO05D005223 1.9e-88 329.7 251 69.3
Lalb_Chr14g0363051 Lupinus albus HOM05D004631 ORTHO05D005223 3.3e-88 328.9 252 68.7
Glyma.16G063100 Glycine max HOM05D004631 ORTHO05D005223 4.8e-87 325.1 252 68.7
arahy.Tifrunner.gnm1.ann1.5W0L45 Arachis hypogaea HOM05D004631 ORTHO05D005223 1.8e-86 323.2 252 67.9
arahy.Tifrunner.gnm1.ann1.NS464T Arachis hypogaea HOM05D004631 ORTHO05D005223 5.3e-86 321.6 252 67.5
Glyma.19G082400 Glycine max HOM05D004631 ORTHO05D005223 1.2e-85 320.5 253 68.0
Psat1g084240 Pisum sativum HOM05D004631 ORTHO05D005223 1.9e-83 313.2 251 66.9
VMungo1383G3654 Vigna mungo HOM05D004631 ORTHO05D005223 1.8e-78 296.6 229 67.7
FAN02G2863 Fragaria x ananassa HOM05D004631 ORTHO05D005223 9.0e-78 294.3 246 65.0
QL02p072911 Quercus lobata HOM05D004631 ORTHO05D005223 1.5e-77 293.5 258 63.2
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 2.5e-75 286.2 248 63.7
Phvul.008G148800 Phaseolus vulgaris HOM05D004631 ORTHO05D005223 1.6e-74 283.5 259 61.4
CiPaw.03G050500 Carya illinoinensis HOM05D004631 ORTHO05D005223 2.7e-74 282.7 257 59.5
Haze_14815 Corylus avellana HOM05D004631 ORTHO05D005223 3.5e-74 282.3 226 65.9
Lj7A605T75 Lonicera japonica HOM05D004631 ORTHO05D005223 3.5e-74 282.3 247 64.4
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 1.3e-73 280.4 246 62.6
Gorai.011G093000 Gossypium raimondii HOM05D004631 ORTHO05D005223 1.3e-73 280.4 257 59.1
TWI59G0755 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 3.0e-73 279.3 257 57.6
Duzib147G1024 Durio zibethinus HOM05D004631 ORTHO05D005223 8.7e-73 277.7 246 62.2
Gohir.D10G085100 Gossypium hirsutum HOM05D004631 ORTHO05D005223 1.5e-72 276.9 257 59.5
Duzib264G0826 Durio zibethinus HOM05D004631 ORTHO05D005223 1.9e-72 276.6 257 59.1
FAN05G1873 Fragaria x ananassa HOM05D004631 ORTHO05D005223 1.9e-72 276.6 247 62.3
Rhsim08G0046200 Rhododendron simsii HOM05D004631 ORTHO05D005223 1.9e-72 276.6 248 63.3
Cfa007277 Carpinus fangiana HOM05D004631 ORTHO05D005223 2.5e-72 276.2 247 60.7
FAN14G1903 Fragaria x ananassa HOM05D004631 ORTHO05D005223 3.3e-72 275.8 247 62.3
vmacro18314 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 7.4e-72 274.6 239 63.2
GSVIVG01001850001 Vitis vinifera HOM05D004631 ORTHO05D005223 9.6e-72 274.2 233 62.2
FAN09G3073 Fragaria x ananassa HOM05D004631 ORTHO05D005223 1.6e-71 273.5 247 61.1
PGR142G2057 Punica granatum HOM05D004631 ORTHO05D005223 4.8e-71 271.9 255 58.4
HanXRQChr17g0549531 Helianthus annuus HOM05D004631 ORTHO05D005223 8.2e-71 271.2 228 64.9
COL.COLO4_29276 Corchorus olitorius HOM05D004631 ORTHO05D005223 2.4e-70 269.6 222 64.0
Gohir.A10G160500 Gossypium hirsutum HOM05D004631 ORTHO05D005223 2.4e-70 269.6 259 58.3
Prupe.3G299600 Prunus persica HOM05D004631 ORTHO05D005223 2.4e-70 269.6 257 59.5
RhsimUnG0241300 Rhododendron simsii HOM05D004631 ORTHO05D005223 4.1e-70 268.9 246 58.5
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 9.0e-70 267.7 248 59.7
CSS0019474 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 2.6e-69 266.2 248 59.3
Sed0025843 Sechium edule HOM05D004631 ORTHO05D005223 4.5e-69 265.4 258 56.2
CiPaw.04G033100 Carya illinoinensis HOM05D004631 ORTHO05D005223 5.8e-69 265.0 246 58.5
Cc07_g00410 Coffea canephora HOM05D004631 ORTHO05D005223 7.6e-69 264.6 246 60.6
Lsat_1_v5_gn_0_32720 Lactuca sativa HOM05D004631 ORTHO05D005223 1.7e-68 263.5 250 59.6
Nn4g22438 Nelumbo nucifera HOM05D004631 ORTHO05D005223 1.7e-68 263.5 250 58.4
DCAR_021756 Daucus carota HOM05D004631 ORTHO05D005223 2.2e-68 263.1 231 60.6
Gorai.012G089800 Gossypium raimondii HOM05D004631 ORTHO05D005223 2.2e-68 263.1 258 58.1
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 5.0e-68 261.9 249 62.2
Hma1.2p1_0227F.1_g095910 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 6.5e-68 261.5 252 59.9
Lj1g0026695 Lotus japonicus HOM05D004631 ORTHO05D005223 6.5e-68 261.5 260 57.3
Atru.chr6.2487 Acer truncatum HOM05D004631 ORTHO05D005223 8.4e-68 261.2 246 59.8
MSTRG.24067 Avicennia marina HOM05D004631 ORTHO05D005223 1.1e-67 260.8 246 57.3
Manes.15G156400 Manihot esculenta HOM05D004631 ORTHO05D005223 1.1e-67 260.8 227 60.8
SGA_v2.0_scaffold18G08240 Striga asiatica HOM05D004631 ORTHO05D005223 1.4e-67 260.4 251 57.0
Gohir.D04G079800 Gossypium hirsutum HOM05D004631 ORTHO05D005223 2.5e-67 259.6 258 57.4
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 3.2e-67 259.2 279 54.1
Cpa.g.c34704 Carica papaya HOM05D004631 ORTHO05D005223 4.2e-67 258.8 230 59.6
PSO063G4908 Papaver somniferum HOM05D004631 ORTHO05D005223 4.2e-67 258.8 245 58.0
TAR371G0552 Trochodendron aralioides HOM05D004631 ORTHO05D005223 5.5e-67 258.5 231 60.2
C07p36360 Brassica napus HOM05D004631 ORTHO05D005223 7.2e-67 258.1 264 54.9
Eucgr.I01692 Eucalyptus grandis HOM05D004631 ORTHO05D005223 1.2e-66 257.3 231 62.3
Thhalv10004822m.g Eutrema salsugineum HOM05D004631 ORTHO05D005223 1.2e-66 257.3 249 56.6
Hma1.2p1_0279F.1_g112270 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 1.2e-66 257.3 246 59.3
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 1.6e-66 256.9 260 55.0
CAN.G473.59 Capsicum annuum HOM05D004631 ORTHO05D005223 1.6e-66 256.9 248 57.7
TAR629G3282 Trochodendron aralioides HOM05D004631 ORTHO05D005223 2.1e-66 256.5 254 57.1
Medtr6g023080 Medicago truncatula HOM05D004631 ORTHO05D005223 2.7e-66 256.1 210 64.8
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 3.5e-66 255.8 246 58.5
Carub.0005s0558 Capsella rubella HOM05D004631 ORTHO05D005223 4.6e-66 255.4 249 56.2
MD09G1017300 Malus domestica HOM05D004631 ORTHO05D005223 4.6e-66 255.4 257 56.0
PSO782G2324 Papaver somniferum HOM05D004631 ORTHO05D005223 4.6e-66 255.4 245 55.9
BcaC06g33833 Brassica carinata HOM05D004631 ORTHO05D005223 7.9e-66 254.6 256 56.2
BolC7t44152H Brassica oleracea HOM05D004631 ORTHO05D005223 7.9e-66 254.6 256 56.2
Sed0000329 Sechium edule HOM05D004631 ORTHO05D005223 7.9e-66 254.6 256 53.9
vmacro05924 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 1.0e-65 254.2 229 60.7
CsaV3_6G001200 Cucumis sativus L. HOM05D004631 ORTHO05D005223 1.8e-65 253.4 234 57.7
AT3G27310 Arabidopsis thaliana HOM05D004631 ORTHO05D005223 2.3e-65 253.1 249 55.8
CARHR148590 Cardamine hirsuta HOM05D004631 ORTHO05D005223 3.0e-65 252.7 250 56.0
BcaC06g31006 Brassica carinata HOM05D004631 ORTHO05D005223 3.9e-65 252.3 260 55.0
ClCG11G006850 Citrullus lanatus HOM05D004631 ORTHO05D005223 3.9e-65 252.3 282 48.9
Manes.07G089400 Manihot esculenta HOM05D004631 ORTHO05D005223 3.9e-65 252.3 227 59.0
Solyc02g093820.4 Solanum lycopersicum HOM05D004631 ORTHO05D005223 3.9e-65 252.3 249 56.2
Sopen02g038460 Solanum pennellii HOM05D004631 ORTHO05D005223 6.7e-65 251.5 249 55.8
AUR62032242 Chenopodium quinoa HOM05D004631 ORTHO05D005223 1.9e-64 250.0 249 58.2
A06p41300 Brassica napus HOM05D004631 ORTHO05D005223 5.7e-64 248.4 254 55.1
BraA06t27055Z Brassica rapa HOM05D004631 ORTHO05D005223 5.7e-64 248.4 254 55.1
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 5.7e-64 248.4 248 56.5
Sabra09G0043700 Salix brachista HOM05D004631 ORTHO05D005223 7.4e-64 248.1 257 54.5
Aqoxy5G03556 Aquilegia oxysepala HOM05D004631 ORTHO05D005223 1.6e-63 246.9 244 57.0
AL5G16540 Arabidopsis lyrata HOM05D004631 ORTHO05D005223 2.2e-63 246.5 232 57.8
MSTRG.3110 Avicennia marina HOM05D004631 ORTHO05D005223 2.2e-63 246.5 247 55.1
Migut.H00060 Erythranthe guttata HOM05D004631 ORTHO05D005223 2.2e-63 246.5 249 55.8
ECA246G0472 Erigeron canadensis HOM05D004631 ORTHO05D005223 4.8e-63 245.4 229 60.3
Potri.009G059300 Populus trichocarpa HOM05D004631 ORTHO05D005223 6.3e-63 245.0 257 53.7
Potri.001G264500 Populus trichocarpa HOM05D004631 ORTHO05D005223 8.2e-63 244.6 246 56.9
unitig_62.g23368 Utricularia gibba HOM05D004631 ORTHO05D005223 1.1e-62 244.2 228 59.2
AUR62011927 Chenopodium quinoa HOM05D004631 ORTHO05D005223 1.8e-62 243.4 249 57.4
MBI05_g32279_MAGBIO Magnolia biondii HOM05D004631 ORTHO05D005223 1.8e-62 243.4 239 56.5
TWI23G0469 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 2.4e-62 243.0 257 52.5
Sabra16G0162600 Salix brachista HOM05D004631 ORTHO05D005223 1.5e-61 240.4 224 58.5
Gohir.A05G341700 Gossypium hirsutum HOM05D004631 ORTHO05D005223 2.6e-61 239.6 240 55.8
Actinidia05943 Actinidia chinensis HOM05D000918 ORTHO05D000791 3.4e-61 239.2 231 58.4
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 3.4e-61 239.2 220 55.9
Dinv25693 Davidia involucrata HOM05D004631 ORTHO05D005223 4.5e-61 238.8 207 64.3
EL10Ac5g10455 Beta vulgaris HOM05D004631 ORTHO05D005223 7.7e-61 238.0 249 53.4
Sp2g16470 Schrenkiella parvula HOM05D004631 ORTHO05D005223 1.0e-60 237.7 249 53.0
DCAR_011290 Daucus carota HOM05D004631 ORTHO05D005223 6.5e-60 235.0 227 57.3
SalBow1G3920 Salvia bowleyana HOM05D004631 ORTHO05D005223 1.4e-59 233.8 281 50.2
Oeu050430.2 Olea europaea HOM05D004631 ORTHO05D005223 2.5e-59 233.0 280 50.4
SalBow1G0328 Salvia bowleyana HOM05D004631 ORTHO05D005223 4.2e-59 232.3 281 49.8
Dinv33383 Davidia involucrata HOM05D004631 ORTHO05D005223 9.4e-59 231.1 160 73.1
Lsat_1_v5_gn_4_185741 Lactuca sativa HOM05D004631 ORTHO05D005223 9.4e-59 231.1 247 54.7
Aa31LG2G5340 Aethionema arabicum HOM05D004631 ORTHO05D005223 1.6e-58 230.3 242 52.1
Sc03g0007030 Simmondsia chinensis HOM05D004631 ORTHO05D005223 6.1e-58 228.4 196 63.8
HanXRQChr15g0487081 Helianthus annuus HOM05D004631 ORTHO05D005223 7.9e-58 228.0 230 56.5
Peaxi162Scf00420g00342 Petunia axillaris HOM05D004631 ORTHO05D005223 1.4e-57 227.3 245 52.2
Peaxi162Scf00420g00345 Petunia axillaris HOM05D004631 ORTHO05D005223 1.8e-57 226.9 245 51.8
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 1.5e-56 223.8 177 68.4
ECA232G0338 Erigeron canadensis HOM05D004631 ORTHO05D005223 7.4e-56 221.5 231 54.5
MELO3C008218.2 Cucumis melo HOM05D004631 ORTHO05D005223 3.4e-53 212.6 177 61.6
TPR.G2332 Trifolium pratense HOM05D004631 ORTHO05D005223 5.9e-53 211.8 165 67.9
ATR0824G076 Amborella trichopoda HOM05D004631 ORTHO05D005223 2.2e-52 209.9 257 48.6
HPP92_028037 Vanilla planifolia HOM05D004631 ORTHO05D005223 2.9e-52 209.5 227 50.7
Medtr0531s0010 Medicago truncatula HOM05D004631 ORTHO05D005223 9.4e-51 204.5 171 64.3
Medtr6g022770 Medicago truncatula HOM05D004631 ORTHO05D005223 1.6e-50 203.8 171 60.8
Oeu058758.2 Olea europaea HOM05D004631 ORTHO05D005223 2.7e-50 203.0 154 65.6
Nitab4.5_0001863g0070 Nicotiana tabacum HOM05D004631 ORTHO05D005223 3.3e-48 196.1 228 50.4
Os04g0485200 Oryza sativa ssp. japonica HOM05D004631 ORTHO05D005223 1.3e-44 184.1 227 45.4
Zm00001eb079230 Zea mays HOM05D004631 ORTHO05D005223 9.4e-43 177.9 230 46.5
Zm00001eb425170 Zea mays HOM05D004631 ORTHO05D005223 1.8e-41 173.7 226 45.6
Mapoly0078s0021 Marchantia polymorpha HOM05D004631 ORTHO05D005223 1.1e-40 171.0 226 42.0
MD10G1138200 Malus domestica HOM05D004631 ORTHO05D005223 1.5e-40 170.6 133 62.4
Prupe.8G176800 Prunus persica HOM05D004631 ORTHO05D005223 5.7e-40 168.7 125 66.4
Ciclev10003548m.g Citrus clementina HOM05D004631 ORTHO05D005223 1.3e-39 167.5 245 48.6
SMO199G0125 Selaginella moellendorffii HOM05D004631 ORTHO05D005223 6.8e-33 145.2 232 36.2
Actinidia35792 Actinidia chinensis HOM05D004631 ORTHO05D005223 4.4e-32 142.5 119 65.5
Pp3c7_140 Physcomitrium patens HOM05D004631 ORTHO05D005223 8.3e-31 138.3 234 38.9
Nitab4.5_0008718g0050 Nicotiana tabacum HOM05D004631 ORTHO05D005223 1.1e-30 137.9 173 48.6
Medtr4g103350 Medicago truncatula HOM05D004631 ORTHO05D005223 3.1e-30 136.3 150 52.7
Potri.001G337533 Populus trichocarpa HOM05D004631 ORTHO05D005223 1.6e-29 134.0 128 55.5
Eucgr.L03061 Eucalyptus grandis HOM05D004631 ORTHO05D005223 3.2e-27 126.3 80 75.0
FAN24G1590 Fragaria x ananassa HOM05D004631 ORTHO05D005223 3.2e-27 126.3 168 46.4
FAN27G0193 Fragaria x ananassa HOM05D004631 ORTHO05D005223 4.2e-27 125.9 129 54.3
FvH4_2g09210 Fragaria vesca HOM05D004631 ORTHO05D005223 1.6e-26 124.0 128 53.9
HPP92_027613 Vanilla planifolia HOM05D004631 ORTHO05D005223 1.4e-22 110.9 119 49.6
BcaC04g23906 Brassica carinata HOM05D004631 ORTHO05D005223 3.5e-21 106.3 91 62.6
A09p03370 Brassica napus HOM05D004631 ORTHO05D005223 2.9e-20 103.2 123 47.2
BraA09t35975Z Brassica rapa HOM05D004631 ORTHO05D005223 2.9e-20 103.2 123 47.2
BraA09t35976Z Brassica rapa HOM05D004631 ORTHO05D005223 2.9e-20 103.2 123 47.2
RcHm_v2.0_Chr6g0265061 Rosa chinensis HOM05D004631 ORTHO05D005223 6.4e-15 85.5 117 47.9
BcaB04g19435 Brassica carinata HOM05D002252 ORTHO05D002451 9.2e-14 81.6 106 49.1
SMO361G0508 Selaginella moellendorffii HOM05D022709 ORTHO05D005223 1.0e-12 78.2 192 31.2
Zm00001eb055680 Zea mays HOM05D004631 ORTHO05D005223 1.2e-10 71.2 105 43.8
HPP92_027614 Vanilla planifolia HOM05D004631 ORTHO05D005223 2.3e-09 67.0 111 36.9
Actinidia36166 Actinidia chinensis HOM05D004631 ORTHO05D005223 4.0e-09 66.2 53 69.8
Sabra16G0218300 Salix brachista HOM05D004631 ORTHO05D005223 3.4e-08 63.2 44 65.9
Cre10.g443650 Chlamydomonas reinhardtii HOM05D004631 ORTHO05D005223 7.5e-08 62.0 115 37.4


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