Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 2.2e-137 492.7 317 100.0
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 2.5e-72 276.6 305 58.0
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 2.5e-72 276.6 305 58.0
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 3.8e-49 199.5 144 72.9
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 1.3e-44 184.5 146 66.4
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 3.2e-40 169.9 131 67.2
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 1.2e-37 161.4 144 59.0
Medtr6g078620 Medicago truncatula HOM05D000139 ORTHO05D019269 9.8e-29 131.7 143 52.4
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 7.7e-26 122.1 145 44.8
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 1.7e-25 120.9 145 44.1
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 2.5e-24 117.1 142 44.4
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 7.2e-24 115.5 148 42.6
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 7.2e-24 115.5 144 44.4
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 9.5e-24 115.2 139 44.6
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 9.5e-24 115.2 140 45.7
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-23 114.8 146 43.8
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 1.6e-23 114.4 148 43.2
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 2.8e-23 113.6 146 44.5
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 4.7e-23 112.8 148 41.9
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 4.7e-23 112.8 145 44.1
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 8.0e-23 112.1 143 43.4
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 8.0e-23 112.1 143 41.3
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 1.4e-22 111.3 150 43.3
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 1.8e-22 110.9 148 41.9
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 4.0e-22 109.8 146 43.2
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 4.0e-22 109.8 146 43.2
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 4.0e-22 109.8 146 43.8
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 5.2e-22 109.4 143 41.3
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 8.8e-22 108.6 149 41.6
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 1.5e-21 107.8 149 41.6
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 2.0e-21 107.5 143 41.3
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 2.6e-21 107.1 143 40.6
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 4.4e-21 106.3 146 39.7
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 5.7e-21 105.9 148 40.5
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 5.7e-21 105.9 143 42.0
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 9.8e-21 105.1 133 45.9
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 9.8e-21 105.1 143 42.0
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 1.3e-20 104.8 148 43.9
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 1.7e-20 104.4 150 42.7
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 1.7e-20 104.4 143 37.1
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 2.2e-20 104.0 179 34.6
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 2.8e-20 103.6 144 38.2
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 3.7e-20 103.2 144 39.6
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 3.7e-20 103.2 143 41.3
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 4.9e-20 102.8 146 40.4
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 4.9e-20 102.8 140 40.7
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 6.3e-20 102.4 146 41.8
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 8.3e-20 102.1 145 39.3
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 8.3e-20 102.1 148 40.5
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-19 101.7 147 39.5
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.8e-19 100.9 148 39.9
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 5.4e-19 99.4 129 44.2
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 7.0e-19 99.0 149 39.6
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-18 98.2 120 40.0
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 7.8e-18 95.5 145 37.9
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 7.8e-18 95.5 144 40.3
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 1.7e-17 94.4 142 38.7
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.7e-17 94.4 142 40.1
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 2.9e-17 93.6 149 38.9
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.9e-17 93.6 129 39.5
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 1.5e-16 91.3 156 35.9
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.5e-16 91.3 128 42.2
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 4.3e-16 89.7 124 38.7
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 5.6e-16 89.4 151 36.4
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 5.6e-16 89.4 151 38.4
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 7.3e-16 89.0 151 36.4
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 9.5e-16 88.6 145 36.6
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 2.1e-15 87.4 118 42.4
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 2.8e-15 87.0 146 35.6
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 3.6e-15 86.7 97 46.4
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 1.0e-14 85.1 97 45.4
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-14 84.7 145 35.9
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 1.4e-14 84.7 144 36.8
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 1.8e-14 84.3 139 34.5
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.3e-14 84.0 124 41.1
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 5.2e-14 82.8 151 37.7
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 1.5e-13 81.3 109 43.1
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 3.4e-13 80.1 126 37.3
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 4.4e-13 79.7 141 34.0
TPR.G27412 Trifolium pratense HOM05D000139 ORTHO05D000103 5.7e-13 79.3 100 42.0
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 3.7e-12 76.6 143 37.8
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 6.4e-12 75.9 151 33.1
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 8.3e-12 75.5 143 38.5
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 7.8e-10 68.9 117 37.6
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 2.3e-09 67.4 102 38.2
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 3.0e-09 67.0 63 60.3
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 6.6e-09 65.9 160 30.6
Ca_30483_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 6.6e-09 65.9 76 43.4
Ca_05666_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 1.5e-08 64.7 71 46.5
Glyma.14G198401 Glycine max HOM05D000139 ORTHO05D213612 1.5e-08 64.7 101 36.6
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 1.9e-08 64.3 159 30.8
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 1.9e-08 64.3 146 32.9
arahy.Tifrunner.gnm1.ann1.NCQ3Z1 Arachis hypogaea HOM05D000139 ORTHO05D000103 5.6e-08 62.8 149 29.5
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 3.1e-06 57.0 160 30.0
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 5.2e-06 56.2 91 36.3
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 6.8e-06 55.8 129 32.6


User provided reference genes

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