Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0013331 Lotus japonicus HOM05D008997 ORTHO05D011051 5.6e-69 264.2 140 100.0
Ca_25045_v3 Cicer arietinum L. HOM05D008997 ORTHO05D011051 1.7e-49 199.5 141 77.3
Phvul.002G121500 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 2.2e-49 199.1 126 84.1
Phvul.004G038900 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 3.2e-48 195.3 127 82.7
Psat2g145480 Pisum sativum HOM05D008997 ORTHO05D011051 5.4e-48 194.5 122 82.8
Medtr5g025520 Medicago truncatula HOM05D008997 ORTHO05D011051 3.0e-46 188.7 122 81.1
Lalb_Chr09g0324991 Lupinus albus HOM05D008997 ORTHO05D011051 5.1e-46 188.0 127 78.0
VMungo0464G1626 Vigna mungo HOM05D008997 ORTHO05D011051 6.6e-46 187.6 128 81.2
Lalb_Chr05g0215081 Lupinus albus HOM05D008997 ORTHO05D011051 1.1e-45 186.8 127 77.2
Glyma.11G090500 Glycine max HOM05D008997 ORTHO05D011051 1.8e-43 179.5 128 77.3
TPR.G8981 Trifolium pratense HOM05D008997 ORTHO05D011051 3.2e-40 168.7 126 69.0
arahy.Tifrunner.gnm1.ann1.G1G4QR Arachis hypogaea HOM05D008997 ORTHO05D011051 4.2e-32 141.7 159 55.3
arahy.Tifrunner.gnm1.ann1.QSM4Y5 Arachis hypogaea HOM05D008997 ORTHO05D011051 4.2e-32 141.7 159 55.3
VMungo1215G3078 Vigna mungo HOM05D008997 ORTHO05D011051 1.3e-22 110.2 127 57.5
CiPaw.11G075100 Carya illinoinensis HOM05D008997 ORTHO05D011051 2.8e-20 102.4 136 50.7
QL12p004181 Quercus lobata HOM05D008997 ORTHO05D011051 1.1e-16 90.5 102 51.0
MD08G1001500 Malus domestica HOM05D008997 ORTHO05D011051 3.2e-16 89.0 114 48.2
Prupe.1G353500 Prunus persica HOM05D008997 ORTHO05D011051 3.2e-16 89.0 134 44.8
MD15G1000800 Malus domestica HOM05D008997 ORTHO05D011051 5.5e-16 88.2 114 48.2
RcHm_v2.0_Chr6g0304331 Rosa chinensis HOM05D008997 ORTHO05D011051 1.2e-15 87.0 129 43.4
Sed0009134 Sechium edule HOM05D008997 ORTHO05D011051 1.6e-15 86.7 81 51.9
FAN21G1803 Fragaria x ananassa HOM05D008997 ORTHO05D011051 3.0e-14 82.4 133 40.6
FAN21G1189 Fragaria x ananassa HOM05D008997 ORTHO05D011051 3.9e-14 82.0 132 40.2
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.1e-14 81.6 126 42.1
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 8.7e-14 80.9 133 39.8
Atru.chr8.2628 Acer truncatum HOM05D008997 ORTHO05D011051 1.9e-13 79.7 96 46.9
FvH4_2g37377 Fragaria vesca HOM05D008997 ORTHO05D011051 1.9e-13 79.7 133 39.8
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.3e-13 79.0 133 39.1
PGR031G0389 Punica granatum HOM05D008997 ORTHO05D011051 3.3e-13 79.0 98 41.8
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 9.6e-13 77.4 125 40.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.3e-12 77.0 140 38.6
COL.COLO4_11281 Corchorus olitorius HOM05D008997 ORTHO05D011051 8.2e-12 74.3 74 52.7
FAN21G1848 Fragaria x ananassa HOM05D008997 ORTHO05D011051 8.2e-12 74.3 148 37.2
Ciclev10013116m.g Citrus clementina HOM05D008997 ORTHO05D011051 1.4e-11 73.6 70 50.0
Eucgr.D02561 Eucalyptus grandis HOM05D008997 ORTHO05D011051 4.1e-11 72.0 85 44.7
Thecc.03G319000 Theobroma cacao HOM05D008997 ORTHO05D011051 3.4e-10 68.9 84 45.2
FAN27G1108 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.7e-09 66.6 148 35.1
Sabra05G0064400 Salix brachista HOM05D008997 ORTHO05D011051 3.8e-09 65.5 79 41.8
Potri.005G078400 Populus trichocarpa HOM05D008997 ORTHO05D011051 5.0e-09 65.1 73 45.2
Manes.10G091000 Manihot esculenta HOM05D008997 ORTHO05D011051 3.2e-08 62.4 69 44.9
Ca_25044_v3 Cicer arietinum L. HOM05D000827 ORTHO05D001318 4.2e-08 62.0 92 38.0
Glyma.01G154200 Glycine max HOM05D000827 ORTHO05D001318 5.5e-08 61.6 77 42.9
Glyma.11G090400 Glycine max HOM05D000827 ORTHO05D001318 9.3e-08 60.8 77 41.6
THA.LOC104798526 Tarenaya hassleriana HOM05D013199 ORTHO05D015353 9.3e-08 60.8 93 34.4
Cc08_g05790 Coffea canephora HOM05D000827 ORTHO05D001318 2.1e-07 59.7 102 34.3
Thecc.03G319100 Theobroma cacao HOM05D000827 ORTHO05D001318 2.1e-07 59.7 101 31.7
CSS0043160 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 4.6e-07 58.5 91 37.4
Haze_08436 Corylus avellana HOM05D000827 ORTHO05D001318 1.0e-06 57.4 96 30.2
Lj2g0023362 Lotus japonicus HOM05D000827 ORTHO05D001318 1.0e-06 57.4 90 35.6
Medtr5g025500 Medicago truncatula HOM05D000827 ORTHO05D001318 1.0e-06 57.4 77 39.0
Potri.009G092200 Populus trichocarpa HOM05D000827 ORTHO05D001318 1.0e-06 57.4 98 34.7
SGA_v2.0_scaffold98G29374 Striga asiatica HOM05D000827 ORTHO05D001318 1.0e-06 57.4 80 36.2
CANSAT80G2464 Cannabis sativa HOM05D000827 ORTHO05D001318 1.3e-06 57.0 80 36.2
THA.LOC104814391 Tarenaya hassleriana HOM05D000827 ORTHO05D001318 1.8e-06 56.6 104 34.6
Potri.001G297400 Populus trichocarpa HOM05D000827 ORTHO05D001318 2.3e-06 56.2 98 33.7
TWI34G0874 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 3.0e-06 55.8 89 40.4
GSVIVG01036871001 Vitis vinifera HOM05D000827 ORTHO05D001318 3.0e-06 55.8 110 35.5
BcaB07g32822 Brassica carinata HOM05D000827 ORTHO05D001318 3.9e-06 55.5 97 37.1
Gohir.A08G149400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 3.9e-06 55.5 79 38.0
Nitab4.5_0000792g0150 Nicotiana tabacum HOM05D000827 ORTHO05D001318 3.9e-06 55.5 77 39.0
Sabra09G0070900 Salix brachista HOM05D000827 ORTHO05D001318 3.9e-06 55.5 98 32.7
Thhalv10017454m.g Eutrema salsugineum HOM05D000827 ORTHO05D001318 5.1e-06 55.1 104 33.7
PGR042G0057 Punica granatum HOM05D000827 ORTHO05D001318 5.1e-06 55.1 101 33.7
QL04p053399 Quercus lobata HOM05D000827 ORTHO05D001318 5.1e-06 55.1 77 39.0
Sp1g27440 Schrenkiella parvula HOM05D000827 ORTHO05D001318 5.1e-06 55.1 103 34.0
AL4G31640 Arabidopsis lyrata HOM05D000827 ORTHO05D001318 6.7e-06 54.7 106 34.0
Cfa012293 Carpinus fangiana HOM05D000827 ORTHO05D001318 6.7e-06 54.7 95 32.6
vmacro00092 Vaccinium macrocarpon HOM05D000827 ORTHO05D001318 6.7e-06 54.7 104 35.6
Gohir.D11G237200 Gossypium hirsutum HOM05D000827 ORTHO05D001318 8.7e-06 54.3 77 39.0
Gorai.007G250300 Gossypium raimondii HOM05D000827 ORTHO05D001318 8.7e-06 54.3 77 39.0
Lalb_Chr05g0215071 Lupinus albus HOM05D000827 ORTHO05D001318 8.7e-06 54.3 94 36.2
Sabra16G0186400 Salix brachista HOM05D000827 ORTHO05D001318 8.7e-06 54.3 74 37.8
TAR629G0081 Trochodendron aralioides HOM05D000827 ORTHO05D001318 8.7e-06 54.3 103 33.0
vmacro13599 Vaccinium macrocarpon HOM05D000827 ORTHO05D001318 8.7e-06 54.3 77 37.7
GSVIVG01019325001 Vitis vinifera HOM05D000827 ORTHO05D001318 8.7e-06 54.3 77 39.0


User provided reference genes

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