Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 2.4e-204 715.3 364 100.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.4e-164 583.2 359 78.0
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 5.3e-164 581.3 359 78.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 7.7e-163 577.4 352 77.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.0e-162 577.0 352 76.4
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.1e-161 573.5 359 79.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.7e-160 568.9 352 77.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.8e-159 566.2 364 77.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.0e-151 540.4 352 73.3
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 4.0e-151 538.5 352 72.2
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.2e-149 532.7 352 72.2
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.4e-148 530.0 350 75.7
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.8e-148 529.6 363 71.3
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.0e-147 526.2 362 68.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 5.9e-147 524.6 351 74.4
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.9e-147 524.6 354 71.2
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.0e-146 523.9 351 74.4
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.7e-146 523.1 351 74.1
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 2.9e-146 522.3 364 72.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.9e-146 522.3 351 74.1
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.6e-144 516.5 355 71.0
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 4.7e-144 515.0 360 69.2
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 8.0e-144 514.2 351 68.1
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 2.3e-143 512.7 354 69.5
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.0e-143 511.9 358 69.6
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 5.2e-143 511.5 355 67.6
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 6.8e-143 511.1 352 72.4
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 9.8e-142 507.3 352 71.3
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 6.4e-141 504.6 352 69.0
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.4e-140 501.5 332 70.8
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 7.8e-139 497.7 355 65.6
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.3e-138 496.9 355 68.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 2.3e-138 496.1 358 65.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.3e-138 496.1 352 68.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 3.9e-138 495.4 451 56.8
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.1e-137 493.8 351 66.7
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.5e-137 493.4 352 66.5
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 5.6e-137 491.5 361 63.2
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 5.6e-137 491.5 356 66.0
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.4e-135 486.9 355 63.9
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.3e-135 486.1 351 63.8
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 8.9e-135 484.2 352 63.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.2e-134 483.8 351 63.8
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 5.8e-134 481.5 385 60.3
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 6.4e-133 478.0 351 62.1
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.9e-132 476.5 361 62.3
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.0e-130 470.7 416 58.2
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 8.6e-130 467.6 416 57.9
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 7.3e-129 464.5 351 69.8
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 9.5e-129 464.2 353 64.0
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 7.5e-126 454.5 364 59.9
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.6e-123 446.8 354 59.6
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 8.6e-122 441.0 358 57.8
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.9e-121 439.9 353 65.7
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.9e-121 439.9 353 65.7
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.3e-121 438.7 353 65.4
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.8e-120 436.0 356 57.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.4e-116 423.7 315 61.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.9e-116 423.3 363 57.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.4e-116 422.9 353 56.9
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 7.8e-115 417.9 384 56.2
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.3e-114 417.2 354 59.6
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 5.8e-110 401.7 457 47.5
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 7.9e-99 364.8 287 60.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.0e-93 347.8 191 81.7
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.4e-89 331.6 197 77.2
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 3.4e-86 322.8 216 74.5
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 7.1e-84 315.1 363 43.8
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.6e-83 312.4 370 42.4
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.8e-80 303.1 292 53.8
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.1e-79 301.2 238 58.4
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.5e-73 280.8 344 47.4
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.5e-62 244.2 160 69.4
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 8.5e-61 238.4 147 73.5
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.5e-60 237.7 231 49.4
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.1e-55 221.5 251 47.4
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.2e-54 218.0 369 34.1
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.7e-53 214.2 140 67.9
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 3.8e-45 186.4 161 67.7
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 3.0e-42 176.8 129 69.8
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.6e-38 164.5 105 69.5
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.1e-35 154.1 423 28.1
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.0e-34 151.8 376 30.6
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.6e-27 127.9 104 64.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.5e-25 121.3 69 75.4
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.4e-25 119.8 103 60.2
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.4e-25 119.8 108 50.0
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.3e-24 118.2 73 69.9
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.4e-23 114.0 109 46.8
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 9.2e-23 112.1 70 65.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 9.2e-23 112.1 70 65.7
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.5e-22 110.2 114 53.5
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-21 108.2 68 76.5
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.7e-21 107.8 68 75.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 2.3e-21 107.5 58 77.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.6e-21 105.9 68 73.5
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-20 104.4 68 73.5
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.5e-20 104.0 290 27.6
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.8e-18 95.9 77 63.6
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.8e-17 92.0 89 55.1
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 7.8e-14 82.4 61 62.3
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.0e-13 80.5 52 65.4
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 7.3e-12 75.9 196 34.2
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.3e-10 70.9 52 61.5
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.8e-10 69.3 94 37.2
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.6e-09 67.4 165 29.7
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.3e-08 65.1 79 45.6


User provided reference genes

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