Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 3.0e-221 771.5 390 100.0
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 4.5e-177 624.8 390 83.3
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 2.2e-176 622.5 399 81.5
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 5.0e-176 621.3 390 82.8
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 1.1e-175 620.2 400 79.5
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 9.4e-175 617.1 356 86.5
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 2.8e-171 605.5 410 77.3
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 2.7e-169 599.0 400 77.2
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 3.5e-169 598.6 400 76.5
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 1.5e-167 593.2 402 75.9
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 6.6e-152 541.2 367 72.5
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 2.8e-150 535.8 402 69.9
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.8e-149 533.1 379 71.5
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.8e-149 533.1 401 68.8
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 5.2e-149 531.6 405 67.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 6.8e-149 531.2 382 70.9
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.2e-148 530.4 345 75.7
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.2e-148 530.4 401 69.1
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 8.3e-147 524.2 396 67.4
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.1e-146 523.9 383 68.9
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 2.4e-146 522.7 411 68.1
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 3.2e-146 522.3 382 68.6
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 5.4e-146 521.5 396 69.4
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 7.0e-146 521.2 397 67.8
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 1.2e-145 520.4 379 70.2
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.6e-145 520.0 409 65.3
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 2.7e-145 519.2 380 70.0
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 4.6e-145 518.5 343 74.6
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 6.0e-145 518.1 382 68.3
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 7.8e-145 517.7 410 66.1
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 3.0e-144 515.8 295 86.1
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 5.0e-144 515.0 380 70.0
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 6.6e-144 514.6 349 72.2
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.5e-143 513.5 381 68.2
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 1.5e-143 513.5 413 66.8
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.5e-143 513.5 413 66.8
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.9e-143 513.1 380 68.2
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.9e-143 513.1 378 70.1
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.3e-143 512.3 385 68.6
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 4.3e-143 511.9 340 71.8
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 4.3e-143 511.9 369 68.3
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.6e-143 511.5 380 69.5
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 3.6e-142 508.8 379 68.6
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 3.6e-142 508.8 397 66.0
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.4e-141 506.9 396 65.9
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 8.9e-141 504.2 411 63.7
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 8.9e-141 504.2 342 70.8
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.5e-140 503.4 413 65.9
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.0e-140 503.1 412 63.8
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 3.4e-140 502.3 392 64.5
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.4e-140 502.3 367 67.3
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 4.4e-140 501.9 393 64.1
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 9.8e-140 500.7 399 64.7
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 2.2e-139 499.6 346 70.5
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 2.9e-139 499.2 408 65.0
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 8.3e-139 497.7 376 67.0
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.9e-138 496.5 377 68.7
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.2e-138 495.7 409 63.3
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 3.2e-138 495.7 346 70.5
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 4.1e-138 495.4 402 63.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 5.4e-138 495.0 399 63.4
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.6e-137 493.4 394 65.0
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 2.1e-137 493.0 395 63.8
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 2.1e-137 493.0 395 63.8
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 6.0e-137 491.5 392 64.0
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 6.0e-137 491.5 342 69.6
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.0e-136 490.7 402 63.2
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.0e-136 490.7 402 63.2
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.0e-136 489.2 374 65.0
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 5.1e-136 488.4 342 69.0
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 6.6e-136 488.0 344 70.3
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 8.6e-136 487.6 440 61.4
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 1.1e-135 487.3 342 68.1
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.5e-135 486.9 346 67.6
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 2.5e-135 486.1 342 68.1
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 7.3e-135 484.6 348 69.0
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.8e-134 482.6 319 74.9
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 2.8e-134 482.6 359 66.3
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 3.6e-134 482.3 397 63.7
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 4.7e-134 481.9 344 68.9
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 3.1e-133 479.2 311 75.6
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 2.6e-132 476.1 363 65.6
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 7.6e-132 474.6 434 58.5
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 6.4e-131 471.5 346 66.5
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 8.4e-131 471.1 323 71.8
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 7.1e-130 468.0 392 62.0
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 1.2e-129 467.2 349 65.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.6e-129 466.8 320 70.3
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 3.5e-129 465.7 346 66.8
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 3.5e-129 465.7 344 66.9
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 6.8e-125 451.4 375 62.7
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 2.5e-119 433.0 405 57.8
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 2.5e-119 433.0 365 59.7
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 4.0e-117 425.6 380 57.1
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 2.6e-116 422.9 409 60.6
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 9.9e-116 421.0 327 66.4
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 4.6e-105 385.6 257 72.4
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 6.0e-105 385.2 364 54.7
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.0e-104 384.4 249 75.1
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 4.3e-103 379.0 249 74.3
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 5.8e-100 368.6 296 65.2
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 9.3e-98 361.3 357 58.3
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 5.1e-96 355.5 274 65.7
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 3.2e-90 336.3 298 60.7
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 2.2e-83 313.5 376 43.1
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 3.2e-82 309.7 349 45.3
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 7.9e-81 305.1 210 72.4
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 2.9e-67 260.0 343 40.2
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.4e-61 241.1 183 61.2
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 6.6e-43 179.1 125 67.2
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.8e-40 171.0 101 82.2
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 2.2e-38 164.1 192 45.8
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.3e-35 154.1 92 79.3
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.8e-32 144.4 160 50.0
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 5.2e-32 142.9 151 50.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.9e-29 134.4 128 59.4
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.6e-17 94.7 88 58.0
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 5.8e-15 86.3 53 67.9
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 4.9e-14 83.2 94 52.1


User provided reference genes

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