Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 4.2e-127 458.0 225 100.0
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 1.8e-69 266.5 228 57.9
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 5.8e-68 261.5 231 57.6
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 2.2e-67 259.6 228 56.6
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 1.6e-65 253.4 229 57.6
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.6e-62 243.4 211 58.8
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 2.1e-62 243.0 231 55.0
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.1e-61 240.7 230 53.9
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 2.4e-61 239.6 230 54.3
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 6.9e-61 238.0 216 56.0
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 6.9e-61 238.0 216 55.6
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 5.4e-58 228.4 224 50.4
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.0e-56 224.2 198 55.1
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 5.6e-55 218.4 229 48.5
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.4e-53 213.8 204 54.4
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 9.0e-53 211.1 198 51.0
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 9.0e-53 211.1 198 51.0
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 9.0e-53 211.1 208 52.4
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.2e-52 210.7 229 47.6
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.3e-51 207.2 233 47.6
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.7e-51 206.8 220 47.3
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.7e-51 206.8 199 50.8
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 3.8e-51 205.7 228 46.1
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 3.8e-51 205.7 197 48.7
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 6.4e-51 204.9 247 45.3
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 8.4e-51 204.5 199 49.2
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 1.1e-50 204.1 231 43.7
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 2.4e-50 203.0 197 50.3
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 3.2e-50 202.6 198 50.5
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 7.1e-50 201.4 216 46.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 9.3e-50 201.1 216 48.6
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.6e-49 200.3 182 52.2
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 1.8e-48 196.8 216 46.8
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 2.3e-48 196.4 198 48.0
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 5.1e-48 195.3 201 50.7
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 6.7e-48 194.9 216 46.3
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 8.7e-48 194.5 216 46.3
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.5e-47 193.0 224 44.6
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 5.6e-47 191.8 210 44.3
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 9.6e-47 191.0 230 43.5
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.6e-46 190.3 197 48.7
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 2.8e-46 189.5 197 49.2
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 4.8e-46 188.7 229 42.8
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.1e-45 187.6 201 46.8
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.4e-45 186.4 201 47.8
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 5.3e-45 185.3 201 47.3
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 9.0e-45 184.5 236 43.2
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.2e-44 184.1 232 42.7
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 3.4e-44 182.6 231 39.4
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 4.5e-44 182.2 200 46.5
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 5.8e-44 181.8 204 47.1
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.7e-43 180.3 236 42.4
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 3.8e-43 179.1 164 51.8
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 4.9e-43 178.7 164 52.4
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.9e-43 178.7 236 42.4
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.4e-42 177.2 148 58.1
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.9e-42 176.8 231 42.4
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 2.5e-42 176.4 226 42.0
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.5e-42 176.4 236 40.7
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 3.2e-42 176.0 202 44.1
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.8e-40 170.2 203 42.9
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.3e-40 169.9 233 41.2
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 3.0e-40 169.5 197 46.7
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 1.9e-39 166.8 231 39.0
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 2.5e-39 166.4 222 38.7
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 4.3e-39 165.6 231 38.1
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 7.4e-39 164.9 170 49.4
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.6e-38 163.7 210 41.0
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 2.8e-38 162.9 186 47.3
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 8.2e-38 161.4 199 41.2
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 8.2e-38 161.4 222 41.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.1e-37 161.0 204 40.7
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.8e-37 160.2 203 40.4
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 2.4e-37 159.8 203 39.9
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.1e-37 159.1 203 40.4
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 9.0e-37 157.9 176 43.2
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 1.2e-36 157.5 204 40.2
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.5e-36 157.1 207 40.6
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 3.4e-36 156.0 204 40.2
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.3e-35 154.1 199 39.7
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 2.9e-35 152.9 176 41.5
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 5.0e-35 152.1 222 41.0
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.1e-34 151.0 205 40.5
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.1e-34 151.0 220 40.0
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 1.1e-34 151.0 172 40.7
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 3.2e-34 149.4 270 34.1
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 4.2e-34 149.1 176 40.3
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 9.3e-34 147.9 204 37.7
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 1.0e-32 144.4 260 36.2
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 5.1e-32 142.1 195 40.5
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.0e-27 127.9 222 32.9
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.7e-27 127.1 169 37.9
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 2.2e-22 110.2 120 44.2
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 8.5e-19 98.2 119 40.3
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 1.1e-18 97.8 79 50.6
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 9.4e-18 94.7 132 36.4
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.2e-17 94.4 122 39.3
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.0e-16 91.3 90 42.2
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 8.8e-16 88.2 79 49.4
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.7e-14 84.0 66 48.5
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.6e-12 76.6 78 47.4
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 3.5e-12 76.3 197 26.4
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 8.5e-11 71.6 197 24.9
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.2e-09 67.8 175 26.9
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 8.8e-08 61.6 257 23.7
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.0e-07 60.5 70 40.0
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.7e-06 57.4 62 51.6


User provided reference genes

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