Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0011197 Lotus japonicus HOM05D008443 ORTHO05D010587 9.0e-24 113.2 79 100.0
Lalb_Chr16g0382381 Lupinus albus HOM05D008443 ORTHO05D010587 2.9e-14 81.6 80 57.5
Glyma.08G289300 Glycine max HOM05D008443 ORTHO05D010587 1.2e-12 76.3 76 60.5
Manes.05G088700 Manihot esculenta HOM05D008443 ORTHO05D010587 4.6e-12 74.3 78 48.7
Phvul.003G053700 Phaseolus vulgaris HOM05D008443 ORTHO05D010587 4.6e-12 74.3 76 48.7
Glyma.18G135000 Glycine max HOM05D008443 ORTHO05D010587 7.9e-12 73.6 76 50.0
TPR.G35976 Trifolium pratense HOM05D008443 ORTHO05D010587 3.0e-11 71.6 76 51.3
Manes.01G198240 Manihot esculenta HOM05D008443 ORTHO05D010587 5.1e-11 70.9 78 46.2
Gohir.A05G318400 Gossypium hirsutum HOM05D008443 ORTHO05D010587 8.7e-11 70.1 74 44.6
CSS0001689 Camellia sinensis var. sinensis HOM05D008443 ORTHO05D010587 7.4e-10 67.0 79 46.8
CsaV3_5G031740 Cucumis sativus L. HOM05D008443 ORTHO05D010587 7.4e-10 67.0 75 57.3
Gorai.009G343700 Gossypium raimondii HOM05D008443 ORTHO05D010587 7.4e-10 67.0 78 64.1
Medtr8g063410 Medicago truncatula HOM05D008443 ORTHO05D010587 1.3e-09 66.2 76 56.6
QL03p061920 Quercus lobata HOM05D008443 ORTHO05D010587 2.8e-09 65.1 77 45.5
Gohir.D05G320600 Gossypium hirsutum HOM05D008443 ORTHO05D010587 4.8e-09 64.3 77 54.5
ClCG05G025160 Citrullus lanatus HOM05D008443 ORTHO05D010587 6.2e-09 63.9 75 44.0
Gohir.A03G141200 Gossypium hirsutum HOM05D008443 ORTHO05D010587 6.2e-09 63.9 78 41.0
Gorai.005G184100 Gossypium raimondii HOM05D008443 ORTHO05D010587 6.2e-09 63.9 78 41.0
VMungo0251G0489 Vigna mungo HOM05D008443 ORTHO05D010587 8.1e-09 63.5 75 44.0
Nn3g16936 Nelumbo nucifera HOM05D008443 ORTHO05D010587 1.8e-08 62.4 46 60.9
Gohir.D02G164100 Gossypium hirsutum HOM05D008443 ORTHO05D010587 2.4e-08 62.0 78 41.0
MBI15_g19742_MAGBIO Magnolia biondii HOM05D008443 ORTHO05D010587 2.4e-08 62.0 46 58.7
MELO3C012013.2 Cucumis melo HOM05D008443 ORTHO05D010587 3.1e-08 61.6 45 60.0
CiPaw.05G147800 Carya illinoinensis HOM05D008443 ORTHO05D010587 5.3e-08 60.8 46 58.7
Duzib268G1406 Durio zibethinus HOM05D008443 ORTHO05D010587 1.2e-07 59.7 76 42.1
Aqoxy3G03049 Aquilegia oxysepala HOM05D008443 ORTHO05D010587 1.5e-07 59.3 46 56.5
TAR629G3213 Trochodendron aralioides HOM05D008443 ORTHO05D010587 2.0e-07 58.9 77 39.0
MD13G1089100 Malus domestica HOM05D008443 ORTHO05D010587 2.6e-07 58.5 44 63.6
PGR102G0936 Punica granatum HOM05D008443 ORTHO05D010587 3.4e-07 58.2 46 56.5
MD16G1089300 Malus domestica HOM05D008443 ORTHO05D010587 4.5e-07 57.8 44 61.4
Prupe.1G256700 Prunus persica HOM05D008443 ORTHO05D010587 4.5e-07 57.8 44 61.4
Rhsim12G0048000 Rhododendron simsii HOM05D008443 ORTHO05D010587 9.9e-07 56.6 71 42.3
RcHm_v2.0_Chr4g0444191 Rosa chinensis HOM05D008443 ORTHO05D010587 4.9e-06 54.3 44 56.8


User provided reference genes

Program Settings