Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 3.0e-156 555.1 263 100.0
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.9e-123 446.0 264 79.2
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 4.8e-122 441.4 264 79.5
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.5e-120 436.4 263 77.9
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 6.5e-119 431.0 259 77.2
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 4.6e-117 424.9 264 76.1
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 6.0e-117 424.5 263 76.8
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 5.7e-115 417.9 259 74.5
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 8.2e-114 414.1 260 74.6
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 2.2e-103 379.4 254 69.3
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 6.7e-100 367.9 263 65.8
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 2.6e-99 365.9 262 65.6
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 5.7e-99 364.8 267 66.3
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 7.4e-99 364.4 244 73.8
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 2.6e-96 355.9 254 70.5
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 2.5e-94 349.4 267 65.9
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 1.8e-92 343.2 267 62.9
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 1.1e-91 340.5 263 62.4
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 2.0e-91 339.7 267 61.0
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 5.7e-91 338.2 267 60.3
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 3.7e-90 335.5 260 63.8
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 6.3e-90 334.7 267 62.9
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 8.2e-90 334.3 267 63.3
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 1.1e-89 334.0 267 61.8
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.4e-89 333.6 267 63.7
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 2.4e-89 332.8 266 62.4
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 2.6e-88 329.3 264 60.2
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 7.7e-88 327.8 266 62.0
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 7.7e-88 327.8 268 59.7
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 6.5e-87 324.7 264 61.0
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.5e-86 323.6 263 60.8
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 7.2e-86 321.2 261 62.5
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 9.4e-86 320.9 266 59.8
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.2e-85 320.5 263 60.5
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.6e-85 320.1 261 60.2
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 2.1e-85 319.7 271 60.1
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 2.1e-85 319.7 271 60.1
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 4.7e-85 318.5 264 59.8
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 1.4e-84 317.0 266 59.8
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 2.3e-84 316.2 258 61.2
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 2.3e-84 316.2 281 56.9
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 3.0e-84 315.8 273 59.0
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 3.0e-84 315.8 265 60.4
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 5.2e-84 315.1 221 68.3
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 3.3e-83 312.4 258 59.7
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 5.7e-83 311.6 258 60.1
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 7.5e-83 311.2 264 60.6
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 4.8e-82 308.5 266 58.6
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 7.0e-81 304.7 263 57.0
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 1.2e-80 303.9 259 57.1
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 2.7e-80 302.8 267 56.2
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 3.5e-80 302.4 258 58.9
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 3.5e-80 302.4 267 56.2
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.0e-79 300.8 260 60.0
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.0e-79 300.8 262 57.6
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 1.7e-79 300.1 260 58.8
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 2.9e-79 299.3 267 56.2
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 8.5e-79 297.7 266 58.6
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 1.1e-78 297.4 260 59.2
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.5e-78 297.0 265 57.0
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.2e-78 295.8 270 56.3
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 2.7e-77 292.7 219 64.4
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 3.6e-77 292.4 262 56.9
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 8.0e-77 291.2 272 55.9
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 8.0e-77 291.2 266 58.3
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.8e-76 290.0 279 55.9
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 4.4e-75 285.4 230 61.3
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 1.3e-74 283.9 182 73.6
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 2.2e-74 283.1 194 69.6
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 3.7e-74 282.3 257 56.4
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 7.0e-73 278.1 269 53.2
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 9.1e-73 277.7 299 49.5
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.2e-72 277.3 280 53.6
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 7.7e-72 274.6 188 69.1
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 6.5e-71 271.6 263 53.2
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 7.2e-70 268.1 204 64.7
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 2.1e-69 266.5 275 52.7
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 6.1e-69 265.0 194 67.5
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 1.2e-67 260.8 215 58.1
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 9.8e-67 257.7 278 50.0
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 1.1e-65 254.2 259 49.0
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 4.5e-64 248.8 257 52.5
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 5.9e-64 248.4 156 76.9
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 4.3e-62 242.3 266 50.8
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 2.8e-61 239.6 256 47.7
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.8e-60 236.9 198 60.6
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 6.8e-60 235.0 192 63.5
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 7.5e-59 231.5 260 46.5
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 6.4e-58 228.4 205 59.0
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 9.2e-57 224.6 275 44.0
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 2.3e-55 219.9 193 61.7
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.1e-54 217.6 190 58.4
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 9.5e-54 214.5 267 45.7
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.4e-52 210.7 204 54.9
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 2.3e-52 209.9 258 46.9
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 3.1e-52 209.5 278 44.6
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 5.8e-51 205.3 135 67.4
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 3.7e-50 202.6 323 41.2
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.1e-44 184.5 176 55.1
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 4.6e-40 169.1 135 63.0
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 8.6e-39 164.9 161 55.3
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 2.8e-37 159.8 269 39.0
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 3.1e-36 156.4 157 54.1
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 5.2e-36 155.6 134 59.7
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 2.6e-35 153.3 161 51.6
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 1.9e-33 147.1 170 50.0
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.6e-32 144.1 251 39.0
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 8.7e-31 138.3 107 59.8
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 2.3e-23 113.6 173 38.7
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 6.2e-21 105.5 201 35.8
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 6.2e-21 105.5 70 67.1
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 3.4e-19 99.8 70 65.7
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 3.8e-18 96.3 179 37.4
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 3.5e-16 89.7 191 34.0
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 1.4e-09 67.8 269 27.9
AT1G31600 Arabidopsis thaliana HOM05D007105 ORTHO05D009304 8.7e-07 58.5 197 27.4
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 2.5e-06 57.0 138 29.0
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea HOM05D006806 ORTHO05D008448 3.3e-06 56.6 138 29.0


User provided reference genes

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