Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 1.1e-225 786.2 375 100.0
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 1.8e-170 602.8 389 76.3
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 3.7e-168 595.1 384 73.4
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 3.1e-159 565.5 388 72.2
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 4.5e-158 561.6 384 72.7
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 5.9e-158 561.2 390 72.1
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 6.3e-152 541.2 370 72.2
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 1.1e-148 530.4 371 70.9
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 1.0e-146 523.9 373 68.9
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 2.3e-146 522.7 371 69.0
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.7e-144 516.5 379 66.8
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 5.4e-143 511.5 382 67.5
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 9.1e-143 510.8 372 68.3
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 2.3e-141 506.1 383 65.5
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 5.0e-141 505.0 381 66.7
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 1.1e-140 503.8 383 66.3
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 1.1e-140 503.8 383 66.6
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 1.1e-140 503.8 382 66.2
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 3.3e-140 502.3 381 65.1
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 6.1e-139 498.0 373 65.7
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 2.3e-138 496.1 380 63.4
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 3.0e-138 495.7 384 63.5
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 3.0e-138 495.7 377 65.5
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 4.0e-138 495.4 372 67.5
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 6.8e-138 494.6 376 64.6
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 8.9e-138 494.2 387 63.8
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 9.8e-137 490.7 380 64.5
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 3.1e-135 485.7 392 65.1
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 3.1e-135 485.7 392 65.1
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 3.1e-135 485.7 399 61.4
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 9.2e-135 484.2 395 62.0
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 4.5e-134 481.9 388 59.0
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 5.9e-134 481.5 374 62.8
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 7.8e-134 481.1 378 64.3
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 7.8e-134 481.1 378 64.3
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 7.8e-134 481.1 378 64.3
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 7.8e-134 481.1 388 60.1
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 1.3e-133 480.3 391 59.1
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 1.7e-133 479.9 378 64.3
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 1.7e-133 479.9 378 64.0
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.7e-133 479.9 393 60.8
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 5.0e-133 478.4 383 63.4
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 6.6e-133 478.0 379 63.9
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 6.6e-133 478.0 391 62.1
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 8.6e-133 477.6 381 61.2
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 1.1e-132 477.2 381 59.6
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 1.1e-132 477.2 381 59.6
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.5e-132 476.9 392 62.0
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 2.5e-132 476.1 386 61.1
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 3.3e-132 475.7 385 58.7
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 4.3e-132 475.3 381 59.3
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 1.2e-131 473.8 387 62.3
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 2.1e-131 473.0 389 61.4
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 2.8e-131 472.6 383 62.7
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 4.7e-131 471.9 384 60.9
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 6.1e-131 471.5 389 61.2
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 1.4e-130 470.3 391 60.9
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 1.8e-130 469.9 382 62.6
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 1.8e-130 469.9 382 58.6
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.8e-130 469.9 389 62.5
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 2.3e-130 469.5 375 62.9
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 2.3e-130 469.5 374 62.8
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 3.1e-130 469.2 384 61.5
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 5.2e-130 468.4 411 59.1
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 8.9e-130 467.6 386 59.8
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 2.0e-129 466.5 383 61.6
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 4.4e-129 465.3 385 62.1
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 1.7e-128 463.4 389 59.4
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 6.4e-128 461.5 391 60.1
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 6.4e-128 461.5 391 60.1
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 6.4e-128 461.5 386 59.8
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.1e-127 460.7 391 59.8
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 1.9e-127 459.9 378 62.4
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 2.4e-127 459.5 395 60.0
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 2.4e-127 459.5 390 60.3
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 2.7e-126 456.1 391 60.1
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 1.9e-124 449.9 307 71.0
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 7.3e-124 448.0 376 60.9
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 4.0e-122 442.2 363 62.5
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 2.0e-121 439.9 389 58.1
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 2.9e-120 436.0 387 55.0
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 5.4e-119 431.8 295 70.5
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 7.1e-119 431.4 375 57.9
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.2e-118 430.6 391 55.5
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 3.5e-118 429.1 383 54.8
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 1.6e-115 420.2 367 58.9
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 2.1e-115 419.9 384 53.4
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 4.0e-114 415.6 377 56.0
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 2.4e-111 406.4 374 55.1
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 6.2e-107 391.7 391 53.7
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 1.5e-105 387.1 285 62.1
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 1.5e-100 370.5 309 60.5
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 3.1e-98 362.8 398 49.5
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 1.5e-97 360.5 255 66.7
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 8.4e-96 354.8 217 77.9
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 6.0e-94 348.6 390 49.2
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 1.9e-92 343.6 288 61.5
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 2.1e-83 313.5 203 71.9
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 4.8e-83 312.4 322 51.2
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 6.9e-82 308.5 163 85.9
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.3e-80 304.3 389 44.0
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.1e-79 301.2 219 64.4
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 3.2e-79 299.7 373 45.6
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 2.2e-64 250.4 381 39.1
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 2.2e-59 233.8 253 47.4
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 5.5e-55 219.2 380 34.5
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 4.4e-52 209.5 141 66.7
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 4.2e-47 193.0 184 51.1
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 4.2e-39 166.4 110 66.4
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.2e-38 164.9 136 64.0
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 3.6e-38 163.3 215 42.3
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 8.8e-37 158.7 210 42.4
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 3.5e-33 146.7 214 41.6
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 4.0e-29 133.3 144 45.8
FvH4_3g14282 Fragaria vesca HOM05D006114 ORTHO05D007609 1.1e-26 125.2 103 64.1
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 8.6e-24 115.5 98 58.2
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 8.6e-24 115.5 92 58.7
Zm00001eb243390 Zea mays HOM05D006114 ORTHO05D007609 7.2e-23 112.5 94 56.4
VMungo1383G2819 Vigna mungo HOM05D006114 ORTHO05D007609 1.0e-21 108.6 81 64.2
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 1.8e-18 97.8 76 56.6
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 2.4e-18 97.4 88 52.3
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 9.2e-18 95.5 103 46.6
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 5.0e-16 89.7 103 41.7
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 4.3e-15 86.7 58 67.2
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 1.6e-14 84.7 375 25.6
DCAR_025461 Daucus carota HOM05D004302 ORTHO05D004939 1.8e-13 81.3 350 25.7
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 2.3e-13 80.9 68 61.8
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 1.5e-12 78.2 152 40.1
Lj1P1149T39 Lonicera japonica HOM05D005977 ORTHO05D007546 3.4e-12 77.0 381 25.7
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 3.4e-12 77.0 373 24.7
Pp3c24_8170 Physcomitrium patens HOM05D002809 ORTHO05D004939 3.4e-12 77.0 386 25.1
TAR381G0769 Trochodendron aralioides HOM05D003005 ORTHO05D004939 8.3e-11 72.4 362 24.6
Pp3c3_5460 Physcomitrium patens HOM05D002809 ORTHO05D004563 7.0e-10 69.3 393 26.2
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 3.5e-09 67.0 335 23.0
FvH4_6g34680 Fragaria vesca HOM05D006114 ORTHO05D007609 4.6e-09 66.6 54 64.8
Mapoly0063s0077 Marchantia polymorpha HOM05D002809 ORTHO05D004939 1.7e-08 64.7 401 23.7
Os06g0665400 Oryza sativa ssp. japonica HOM05D005977 ORTHO05D007546 2.3e-08 64.3 401 26.2
TAR626G0406 Trochodendron aralioides HOM05D007753 ORTHO05D009385 6.6e-08 62.8 378 25.1
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 3.3e-07 60.5 340 23.8
MSTRG.25314 Avicennia marina HOM05D006114 ORTHO05D007609 5.6e-07 59.7 77 41.6
SEGI_20973 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 9.5e-07 58.9 400 23.2
Sc20g0003450 Simmondsia chinensis HOM05D006114 ORTHO05D007609 1.2e-06 58.5 44 61.4
arahy.Tifrunner.gnm1.ann1.M43JJC Arachis hypogaea HOM05D007753 ORTHO05D009385 3.6e-06 57.0 141 31.9


User provided reference genes

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