Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.3e-206 721.5 361 100.0
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.9e-153 546.2 357 81.5
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.5e-153 545.8 369 78.9
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 4.7e-152 541.6 366 79.2
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 6.1e-152 541.2 359 79.7
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 8.8e-151 537.3 356 80.1
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 5.7e-150 534.6 330 83.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.7e-149 533.1 314 86.3
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 9.4e-145 517.3 316 81.3
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.7e-144 515.8 316 81.3
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 2.3e-143 512.7 332 79.2
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.1e-142 510.4 348 76.7
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.0e-142 509.6 349 76.2
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 7.5e-142 507.7 305 83.0
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.7e-141 505.4 324 79.3
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 7.0e-140 501.1 312 80.4
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 7.0e-140 501.1 324 79.9
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.6e-139 500.0 311 80.7
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 2.0e-139 499.6 323 79.3
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 2.0e-139 499.6 320 78.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 7.7e-139 497.7 312 81.1
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.7e-138 496.5 332 79.5
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 5.0e-138 495.0 322 79.5
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 5.0e-138 495.0 300 83.3
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 5.0e-138 495.0 332 77.4
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.1e-137 493.8 330 77.9
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.9e-137 493.0 320 76.9
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 5.5e-137 491.5 354 73.2
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 9.4e-137 490.7 317 80.4
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.2e-136 490.3 324 79.0
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 2.1e-136 489.6 360 72.2
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 2.7e-136 489.2 326 76.4
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.0e-136 487.6 354 73.7
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.0e-135 487.3 372 72.0
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 1.4e-135 486.9 311 79.4
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 1.8e-135 486.5 365 70.7
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 3.0e-135 485.7 340 74.7
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.0e-135 485.7 317 77.9
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 4.0e-135 485.3 340 73.8
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 5.2e-135 485.0 318 78.9
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 8.8e-135 484.2 336 73.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.2e-134 483.8 318 78.3
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.0e-134 483.0 301 81.1
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 3.4e-134 482.3 341 73.3
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 4.4e-134 481.9 302 79.5
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 5.7e-134 481.5 319 78.1
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 7.5e-134 481.1 298 81.2
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 9.8e-134 480.7 302 81.5
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.3e-133 480.3 364 69.2
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 3.7e-133 478.8 307 78.5
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.8e-133 478.4 318 76.4
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 6.3e-133 478.0 322 76.1
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.1e-132 477.2 373 68.9
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.4e-132 476.9 349 70.8
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.4e-132 476.9 329 73.9
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 1.8e-132 476.5 354 70.9
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 4.1e-132 475.3 305 77.7
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 4.1e-132 475.3 363 68.0
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 5.4e-132 474.9 310 77.4
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 7.0e-132 474.6 305 78.0
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 7.0e-132 474.6 305 78.0
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 1.6e-131 473.4 314 75.8
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 1.6e-131 473.4 305 77.4
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 2.0e-131 473.0 302 78.1
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 2.7e-131 472.6 310 77.1
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 3.5e-131 472.2 310 77.4
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.0e-130 470.7 306 78.1
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 2.9e-130 469.2 363 70.8
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.9e-129 466.5 432 63.7
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.5e-129 466.1 312 77.9
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.7e-128 462.6 306 75.8
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 4.7e-128 461.8 299 75.9
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 8.0e-128 461.1 277 81.2
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.0e-127 460.7 269 82.5
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 5.2e-127 458.4 304 77.3
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.8e-127 457.6 284 81.0
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.5e-126 456.8 358 69.0
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 4.3e-121 438.7 467 56.3
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 2.1e-120 436.4 305 73.4
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 3.6e-120 435.6 365 66.0
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 6.1e-120 434.9 301 74.4
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 8.0e-120 434.5 346 69.4
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 3.4e-118 429.1 466 55.2
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.2e-117 426.4 308 69.5
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 7.8e-115 417.9 471 51.8
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.3e-114 417.2 307 68.4
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 8.6e-114 414.5 300 70.3
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.6e-112 410.2 344 62.8
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.1e-108 395.6 286 68.5
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 8.1e-104 381.3 212 88.7
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 3.7e-101 372.5 314 62.1
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 2.5e-97 359.8 297 67.7
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.1e-96 356.7 237 77.2
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.9e-89 333.6 201 83.6
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 9.9e-86 321.2 310 55.5
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 6.4e-85 318.5 373 52.8
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 3.5e-83 312.8 366 53.0
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 3.3e-81 306.2 165 92.7
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 2.1e-80 303.5 168 89.9
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.9e-79 298.5 203 77.8
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 2.4e-76 290.0 203 72.9
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 3.2e-76 289.7 203 72.9
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.3e-74 283.5 195 76.9
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.9e-74 282.7 191 77.0
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.1e-74 282.3 195 76.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 8.1e-72 275.0 162 85.2
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.6e-70 270.0 257 52.1
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 4.5e-70 269.2 144 89.6
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.2e-69 266.9 150 86.7
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.0e-62 243.8 188 67.6
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.5e-57 226.9 166 71.1
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.6e-56 224.2 259 46.3
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.6e-51 207.6 141 73.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.1e-43 180.6 107 84.1
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.7e-37 161.0 93 81.7
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 2.2e-32 144.1 235 36.6
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.6e-30 137.1 80 85.0
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 5.0e-29 132.9 108 62.0
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-23 114.8 255 33.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.5e-22 109.8 118 45.8
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.7e-16 91.3 51 78.4
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.3e-10 70.9 47 76.6
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 4.9e-08 63.2 71 49.3


User provided reference genes

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