Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 1.7e-67 259.2 132 100.0
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 6.5e-35 151.0 132 65.2
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 7.9e-33 144.1 132 63.6
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 1.3e-30 136.7 136 62.5
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.4e-29 133.3 132 61.4
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.8e-29 132.9 134 61.9
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 9.1e-29 130.6 132 62.1
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 9.1e-29 130.6 132 62.1
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 2.3e-24 115.9 133 58.6
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 3.3e-23 112.1 133 57.9
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 3.4e-20 102.1 138 55.1
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 5.0e-19 98.2 140 52.9
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 3.2e-18 95.5 139 47.5
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 1.6e-17 93.2 138 48.6
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 6.7e-16 87.8 133 49.6
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 6.7e-16 87.8 133 49.6
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 8.8e-16 87.4 141 46.8
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 7.4e-15 84.3 142 45.8
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 7.4e-15 84.3 141 45.4
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 4.8e-14 81.6 133 45.1
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 7.0e-13 77.8 144 47.2
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 9.1e-13 77.4 142 43.0
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 1.2e-12 77.0 135 45.2
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 2.6e-12 75.9 137 41.6
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 1.7e-11 73.2 127 43.3
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 2.9e-11 72.4 141 42.6
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 6.5e-11 71.2 141 41.8
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 4.2e-10 68.6 137 45.3
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.2e-09 67.0 139 39.6
Haze_14778 Corylus avellana HOM05D007617 ORTHO05D007195 1.6e-09 66.6 126 41.3
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 2.1e-09 66.2 137 43.1
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 3.6e-09 65.5 134 38.1
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 3.6e-09 65.5 161 36.0
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 4.7e-09 65.1 146 39.0
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 4.7e-09 65.1 143 36.4
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 1.0e-08 63.9 124 41.9
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 1.8e-08 63.2 135 38.5
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 1.8e-08 63.2 141 39.0
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 2.3e-08 62.8 134 38.8
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 4.0e-08 62.0 151 37.7
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 4.0e-08 62.0 133 41.4
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 6.7e-08 61.2 127 44.1
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 6.7e-08 61.2 134 38.1
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 8.8e-08 60.8 136 39.0
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 8.8e-08 60.8 131 39.7
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.2e-07 60.5 68 58.8
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-07 60.5 68 58.8
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.2e-07 60.5 145 36.6
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 1.5e-07 60.1 137 39.4
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 2.0e-07 59.7 133 38.3
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 2.0e-07 59.7 141 37.6
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 5.7e-07 58.2 143 39.9
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 5.7e-07 58.2 134 38.8
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 9.7e-07 57.4 141 39.0
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 9.7e-07 57.4 143 37.8
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 1.3e-06 57.0 146 37.0
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 1.3e-06 57.0 87 44.8
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.7e-06 56.6 67 56.7
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 1.7e-06 56.6 140 38.6
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 2.8e-06 55.8 139 36.7
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 2.8e-06 55.8 133 34.6
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 2.8e-06 55.8 143 37.8
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 3.7e-06 55.5 136 36.0
CsaV3_3G027400 Cucumis sativus L. HOM05D007617 ORTHO05D007195 3.7e-06 55.5 142 40.1
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 3.7e-06 55.5 137 38.0
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 6.3e-06 54.7 137 37.2
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 6.3e-06 54.7 118 39.8
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 6.3e-06 54.7 137 37.2
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 6.3e-06 54.7 137 37.2
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 8.2e-06 54.3 139 35.3
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 8.2e-06 54.3 135 35.6


User provided reference genes

Program Settings