Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 0.0e+00 1118.2 559 100.0
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-78 297.0 594 35.7
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-66 258.1 589 34.5
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-34 152.1 147 49.0
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-34 150.6 147 49.0
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 9.8e-32 142.5 200 35.5
Lj3g0011059 Lotus japonicus HOM05D008220 ORTHO05D010358 4.8e-31 140.2 404 33.4
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 8.8e-25 119.4 237 32.1
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 5.7e-24 116.7 159 34.6
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-22 112.1 224 30.4
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-21 109.0 146 34.9
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-21 108.2 235 29.4
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 4.5e-21 107.1 243 28.0
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-21 106.7 237 30.0
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-20 105.5 251 31.1
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-20 105.5 200 31.0
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-20 105.1 219 29.7
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-20 105.1 163 32.5
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-20 105.1 162 32.7
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-20 104.8 242 31.4
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-20 104.4 239 27.6
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-19 101.3 218 28.9
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 4.2e-19 100.5 163 33.7
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 5.5e-19 100.1 193 32.6
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-19 99.8 166 31.3
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 9.5e-19 99.4 162 29.6
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-18 97.8 163 30.1
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 4.7e-18 97.1 227 28.6
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-17 93.6 163 28.2
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-17 93.6 163 28.2
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-17 93.6 155 31.6
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-16 91.7 126 35.7
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 2.0e-16 91.7 203 31.5
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-16 91.3 161 29.8
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 9.8e-16 89.4 123 35.0
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-15 89.0 209 26.3
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-15 89.0 157 32.5
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.2e-15 88.2 205 28.8
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-15 87.8 234 24.4
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-15 87.8 196 25.0
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 3.7e-15 87.4 200 29.5
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-15 87.4 190 31.1
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 6.3e-15 86.7 228 25.4
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-14 85.9 196 25.0
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 1.4e-14 85.5 223 26.5
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 9.2e-14 82.8 153 29.4
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 9.2e-14 82.8 228 24.6
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.0e-13 81.6 297 24.2
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-13 80.1 123 31.7
Lj5g0027109 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-12 79.3 207 25.6
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-12 79.3 167 27.5
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-12 79.0 123 30.9
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-12 78.6 166 25.3
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-12 78.6 166 27.1
Lj4g0008223 Lotus japonicus HOM05D008220 ORTHO05D237056 2.3e-12 78.2 142 35.2
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-12 78.2 135 32.6
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-12 77.8 200 27.5
Phvul.006G002800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-12 77.8 204 28.9
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.9e-12 77.4 164 29.3
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 6.6e-12 76.6 150 29.3
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 8.6e-12 76.3 122 31.1
Phvul.004G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.6e-12 76.3 195 25.6
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-11 75.9 166 27.1
Thecc.09G245100 Theobroma cacao HOM05D009258 ORTHO05D009583 1.1e-11 75.9 122 30.3
Lj1g0022989 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-11 75.1 162 30.9
Lj5g0007202 Lotus japonicus HOM05D002777 ORTHO05D001516 2.5e-11 74.7 238 26.5
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 3.3e-11 74.3 140 35.7
Phvul.008G120900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.3e-11 73.9 164 26.2
TPR.G25363 Trifolium pratense HOM05D007807 ORTHO05D001516 5.6e-11 73.6 137 29.9
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 7.3e-11 73.2 177 25.4
Phvul.005G103000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.5e-11 72.8 167 27.5
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-10 72.4 209 24.9
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-10 72.0 556 22.3
Lj6g0023930 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-10 72.0 165 27.9
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-10 72.0 166 25.3
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-10 71.6 171 33.3
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-10 71.6 161 26.1
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-10 70.9 216 26.4
Lj3g0022675 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-10 70.9 161 26.7
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.7e-10 70.5 193 25.4
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.7e-10 70.5 193 25.4
Lj5g0022095 Lotus japonicus HOM05D002777 ORTHO05D001516 6.2e-10 70.1 257 26.8
TPR.G14641 Trifolium pratense HOM05D002777 ORTHO05D001516 6.2e-10 70.1 126 27.8
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 8.0e-10 69.7 181 26.5
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 8.0e-10 69.7 152 28.3
Phvul.010G029500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.0e-09 69.3 132 28.8
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 1.4e-09 68.9 139 29.5
Phvul.011G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-09 68.2 201 27.9
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-09 67.8 134 30.6
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-09 67.4 195 28.7
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 6.8e-09 66.6 241 25.3
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.8e-09 66.6 190 25.8
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 8.9e-09 66.2 235 26.8
Phvul.010G047300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.9e-09 66.2 165 26.7
Phvul.005G121500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-08 65.9 127 29.1
COL.COLO4_03775 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.0e-08 65.1 108 32.4
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 2.6e-08 64.7 191 26.7
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 2.6e-08 64.7 207 26.1
Phvul.010G074100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.4e-08 64.3 204 24.5
Lsat_1_v5_gn_3_28940 Lactuca sativa HOM05D003915 ORTHO05D005386 4.4e-08 63.9 171 31.0
Medtr3g048390 Medicago truncatula HOM05D008558 ORTHO05D011658 4.4e-08 63.9 140 27.1
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.8e-08 63.5 190 28.4
Phvul.008G195328 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.8e-08 63.5 177 24.9
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 5.8e-08 63.5 154 24.7
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 7.5e-08 63.2 190 28.4
Lj2g0025364 Lotus japonicus HOM05D002777 ORTHO05D001516 1.7e-07 62.0 194 25.3
Sc10g0006330 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-07 62.0 164 28.7
Thecc.05G216900 Theobroma cacao HOM05D009258 ORTHO05D009583 1.7e-07 62.0 138 26.8
Lj2g0011520 Lotus japonicus HOM05D002777 ORTHO05D001516 2.2e-07 61.6 147 22.4
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 2.2e-07 61.6 191 24.6
Lj3g0009896 Lotus japonicus HOM05D002777 ORTHO05D001516 2.2e-07 61.6 159 22.0
Atru.chr5.3235 Acer truncatum HOM05D016018 ORTHO05D017146 3.7e-07 60.8 211 25.1
Lsat_1_v5_gn_4_143721 Lactuca sativa HOM05D003915 ORTHO05D005386 4.9e-07 60.5 171 29.8
PSO455G0099 Papaver somniferum HOM05D000054 ORTHO05D000286 4.9e-07 60.5 148 23.0
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 8.3e-07 59.7 259 24.7
Lj2g0013073 Lotus japonicus HOM05D008220 ORTHO05D010358 8.3e-07 59.7 167 26.3
Phvul.009G011500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.3e-07 59.7 134 27.6
Thecc.07G112000 Theobroma cacao HOM05D009258 ORTHO05D009583 8.3e-07 59.7 113 28.3
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 8.3e-07 59.7 162 22.2
Medtr8g045280 Medicago truncatula HOM05D008558 ORTHO05D001516 1.1e-06 59.3 162 26.5
PSO170G1631 Papaver somniferum HOM05D000054 ORTHO05D000286 1.1e-06 59.3 148 23.6
Phvul.008G129600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-06 59.3 164 23.8
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-06 58.9 211 24.2
Lj2g0000729 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-06 58.9 199 24.1
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.4e-06 58.2 180 26.1
Sc06g0004410 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-06 57.8 134 25.4
Sc21g0005420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-06 57.8 146 28.8
Medtr5g053650 Medicago truncatula HOM05D008558 ORTHO05D001516 5.4e-06 57.0 140 30.0
PSO349G0125 Papaver somniferum HOM05D000002 ORTHO05D000001 5.4e-06 57.0 89 33.7
Phvul.010G071200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.4e-06 57.0 157 26.1
Psat3g139800 Pisum sativum HOM05D029979 ORTHO05D026065 5.4e-06 57.0 155 27.1
Phvul.006G015211 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.0e-06 56.6 114 28.9
Psat7g119560 Pisum sativum HOM05D007807 ORTHO05D001516 7.0e-06 56.6 109 33.9
Lsat_1_v5_gn_9_62980 Lactuca sativa HOM05D003915 ORTHO05D005386 9.2e-06 56.2 174 28.7


User provided reference genes

Program Settings