Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 3.3e-286 987.6 485 100.0
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.4e-204 716.5 491 76.2
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 2.2e-173 612.8 489 65.6
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.3e-170 603.6 484 63.8
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 5.1e-162 575.1 475 62.9
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 2.2e-157 559.7 483 60.7
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 4.6e-155 552.0 477 59.5
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.5e-153 547.0 487 59.5
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 7.4e-153 544.7 485 57.7
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 2.8e-152 542.7 483 58.2
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 3.1e-151 539.3 463 60.3
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 4.1e-151 538.9 483 59.0
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 9.0e-151 537.7 477 57.7
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 1.7e-149 533.5 477 57.7
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 2.2e-149 533.1 463 59.2
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 5.0e-149 531.9 474 58.0
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 1.1e-148 530.8 487 57.3
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.4e-148 530.4 480 57.1
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 1.9e-148 530.0 473 57.9
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 4.2e-148 528.9 479 58.5
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 9.3e-148 527.7 482 57.9
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.7e-147 526.2 479 57.6
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 3.0e-146 522.7 481 57.2
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 3.7e-144 515.8 483 55.7
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 8.2e-144 514.6 479 56.8
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 1.4e-143 513.8 495 56.6
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 6.5e-141 505.0 478 55.9
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.9e-140 503.4 477 54.3
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 1.0e-138 497.7 490 55.1
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 1.4e-138 497.3 463 55.5
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 2.3e-138 496.5 574 49.8
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 3.9e-138 495.7 468 54.1
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.1e-137 494.2 476 56.3
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.3e-136 490.7 484 55.4
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 3.7e-136 489.2 487 55.2
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 1.8e-135 486.9 535 51.8
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 9.1e-135 484.6 437 58.1
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.5e-134 483.8 463 53.6
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.4e-134 482.6 489 54.6
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 4.5e-134 482.3 470 54.0
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.1e-132 477.6 558 49.3
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 3.2e-132 476.1 499 52.9
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.6e-131 473.8 466 52.1
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 4.7e-131 472.2 468 52.4
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.4e-130 470.7 490 53.3
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 4.4e-129 465.7 487 53.0
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 7.4e-129 464.9 484 52.3
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 2.2e-128 463.4 585 47.5
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 4.8e-128 462.2 483 49.5
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 3.1e-127 459.5 472 49.2
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 2.6e-126 456.4 473 50.1
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 3.5e-126 456.1 393 62.6
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 2.9e-125 453.0 490 49.4
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 5.5e-124 448.7 327 70.6
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.4e-122 444.1 477 51.4
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 4.0e-122 442.6 464 51.1
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 6.7e-122 441.8 487 48.7
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 9.7e-121 438.0 480 50.8
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 1.7e-120 437.2 467 49.7
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.1e-119 434.5 468 50.4
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.8e-119 433.7 470 51.9
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 5.3e-119 432.2 481 50.1
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.2e-118 431.0 466 47.9
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 5.5e-116 422.2 481 48.4
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.6e-115 420.6 411 55.0
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 8.8e-114 414.8 485 47.8
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 3.7e-112 409.5 471 48.8
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 4.8e-112 409.1 485 47.6
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 3.1e-111 406.4 479 47.8
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 1.2e-110 404.4 369 58.5
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.6e-110 404.1 471 47.6
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.0e-110 403.7 462 47.8
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 5.9e-110 402.1 462 47.8
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 7.7e-110 401.7 493 47.1
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 6.5e-109 398.7 333 62.8
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 1.5e-108 397.5 484 48.8
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 9.5e-108 394.8 358 61.2
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.2e-105 387.9 418 48.1
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.3e-104 384.4 464 47.0
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 2.8e-104 383.3 491 44.6
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 2.0e-102 377.1 473 44.6
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 1.0e-101 374.8 403 50.1
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 7.8e-94 348.6 527 41.9
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 2.0e-89 334.0 471 42.3
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 4.6e-86 322.8 298 57.7
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.8e-83 313.5 538 38.7
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 5.1e-77 292.7 463 40.4
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 2.4e-71 273.9 265 55.8
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 5.8e-65 252.7 411 39.2
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.5e-52 210.7 193 56.0
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.0e-45 188.7 228 49.6
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.1e-42 178.7 173 49.7
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 3.0e-29 134.0 168 47.6
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 2.5e-28 131.0 216 39.4
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 3.2e-23 114.0 122 48.4
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 4.7e-22 110.2 193 34.7
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 1.0e-21 109.0 134 44.8
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 5.1e-21 106.7 177 39.5
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 4.4e-20 103.6 107 48.6
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.3e-18 96.7 74 63.5
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 5.5e-15 86.7 114 43.0
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 7.2e-15 86.3 133 37.6
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.2e-14 85.5 142 38.7
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.2e-14 85.5 142 38.7
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 1.4e-13 82.0 72 55.6
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 2.0e-12 78.2 74 54.1
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.7e-11 75.1 68 47.1
SMO228G0026 Selaginella moellendorffii HOM05D003769 ORTHO05D004521 1.4e-10 72.0 285 26.7
arahy.Tifrunner.gnm1.ann1.K8UYYD Arachis hypogaea HOM05D006479 ORTHO05D008310 2.6e-09 67.8 385 25.7
arahy.Tifrunner.gnm1.ann1.Y6PBB0 Arachis hypogaea HOM05D006479 ORTHO05D008310 2.6e-09 67.8 385 25.7
ECA236G2519 Erigeron canadensis HOM05D004758 ORTHO05D006063 5.9e-09 66.6 162 32.7
Lsat_1_v5_gn_7_26400 Lactuca sativa HOM05D004758 ORTHO05D006063 1.3e-08 65.5 206 27.7
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.7e-08 65.1 52 55.8
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 3.8e-08 63.9 40 72.5
Manes.04G055500 Manihot esculenta HOM05D006479 ORTHO05D008310 3.8e-08 63.9 425 24.2
Cre07.g344050 Chlamydomonas reinhardtii HOM05D004758 ORTHO05D006063 6.5e-08 63.2 210 29.0
Gohir.D05G078100 Gossypium hirsutum HOM05D006479 ORTHO05D008310 6.5e-08 63.2 391 23.8
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 1.1e-07 62.4 272 26.1
Duzib248G0831 Durio zibethinus HOM05D000453 ORTHO05D000387 1.9e-07 61.6 156 29.5
COL.COLO4_25288 Corchorus olitorius HOM05D006479 ORTHO05D008310 2.5e-07 61.2 383 24.0
LjContig00564g0006585 Lotus japonicus HOM05D006479 ORTHO05D008310 2.5e-07 61.2 481 22.9
Medtr5g087680 Medicago truncatula HOM05D006479 ORTHO05D008310 2.5e-07 61.2 393 23.7
TPR.G11782 Trifolium pratense HOM05D006479 ORTHO05D008310 3.2e-07 60.8 390 23.6
PSO063G1271 Papaver somniferum HOM05D004758 ORTHO05D006063 5.5e-07 60.1 132 29.5
Gorai.009G079600 Gossypium raimondii HOM05D006479 ORTHO05D008310 7.2e-07 59.7 390 23.6
PSO782G4173 Papaver somniferum HOM05D004758 ORTHO05D006063 7.2e-07 59.7 132 30.3
PRCOL_00000749 Prasinoderma coloniale HOM05D005961 ORTHO05D007391 9.4e-07 59.3 201 28.9
GSVIVG01037436001 Vitis vinifera HOM05D006479 ORTHO05D008310 9.4e-07 59.3 390 23.1
HanXRQChr04g0115571 Helianthus annuus HOM05D004758 ORTHO05D006063 1.6e-06 58.5 134 32.1
PGSC0003DMG400018492 Solanum tuberosum HOM05D000526 ORTHO05D000956 1.6e-06 58.5 237 23.2
Solyc08g005420.3 Solanum lycopersicum HOM05D000526 ORTHO05D000956 2.1e-06 58.2 250 22.4
EL10Ac7g18031 Beta vulgaris HOM05D000453 ORTHO05D000387 2.7e-06 57.8 139 35.3
Gohir.A05G075300 Gossypium hirsutum HOM05D006479 ORTHO05D008310 2.7e-06 57.8 395 24.3
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 2.7e-06 57.8 235 25.5
Aa31LG1G13720 Aethionema arabicum HOM05D006479 ORTHO05D008310 4.7e-06 57.0 432 23.1
Nitab4.5_0001424g0010 Nicotiana tabacum HOM05D000526 ORTHO05D000956 4.7e-06 57.0 246 23.6
Os07g0600400 Oryza sativa ssp. japonica HOM05D005508 ORTHO05D006882 4.7e-06 57.0 262 25.6
SGA_v2.0_scaffold16G07575 Striga asiatica HOM05D006479 ORTHO05D008310 4.7e-06 57.0 282 23.4
AUR62022086 Chenopodium quinoa HOM05D000453 ORTHO05D000387 6.1e-06 56.6 162 30.2
FvH4_1g26162 Fragaria vesca HOM05D007272 ORTHO05D045475 6.1e-06 56.6 43 65.1
Zm00001eb356040 Zea mays HOM05D001771 ORTHO05D001876 6.1e-06 56.6 220 24.1
Eucgr.K00076 Eucalyptus grandis HOM05D004758 ORTHO05D006063 8.0e-06 56.2 235 23.0
Sabra10G0019000 Salix brachista HOM05D000453 ORTHO05D000387 8.0e-06 56.2 124 31.5


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