Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0009146 Lotus japonicus HOM05D006782 ORTHO05D009662 1.3e-44 182.6 86 100.0
Lalb_Chr16g0380461 Lupinus albus HOM05D006782 ORTHO05D009662 1.6e-21 105.9 84 59.5
Lalb_Chr05g0215191 Lupinus albus HOM05D006782 ORTHO05D009662 1.3e-20 102.8 84 63.1
Phvul.002G122700 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 1.7e-20 102.4 87 63.2
Lj4g0019286 Lotus japonicus HOM05D006782 ORTHO05D009662 2.5e-19 98.6 86 60.5
Glyma.09G218000 Glycine max HOM05D006782 ORTHO05D009662 1.2e-18 96.3 87 59.8
Lalb_Chr09g0325071 Lupinus albus HOM05D006782 ORTHO05D009662 4.0e-17 91.3 84 56.0
Glyma.16G108400 Glycine max HOM05D006782 ORTHO05D009662 1.2e-16 89.7 86 57.0
Medtr8g072170 Medicago truncatula HOM05D006782 ORTHO05D009662 9.8e-16 86.7 85 54.1
Glyma.01G152800 Glycine max HOM05D006782 ORTHO05D009662 1.3e-15 86.3 87 57.5
Glyma.16G108500 Glycine max HOM05D006782 ORTHO05D009662 2.8e-15 85.1 88 54.5
Medtr5g025730 Medicago truncatula HOM05D006782 ORTHO05D009662 1.6e-13 79.3 84 51.2
QL12p003438 Quercus lobata HOM05D006782 ORTHO05D009662 3.8e-12 74.7 85 44.7
arahy.Tifrunner.gnm1.ann1.06JDPW Arachis hypogaea HOM05D006782 ORTHO05D009662 2.5e-11 72.0 87 50.6
arahy.Tifrunner.gnm1.ann1.40LLJ4 Arachis hypogaea HOM05D006782 ORTHO05D009662 2.5e-11 72.0 87 50.6
Ciclev10017790m.g Citrus clementina HOM05D006782 ORTHO05D009662 4.2e-11 71.2 81 42.0
Manes.15G184800 Manihot esculenta HOM05D006782 ORTHO05D009662 4.2e-11 71.2 86 44.2
Potri.004G234800 Populus trichocarpa HOM05D008950 ORTHO05D009662 4.2e-11 71.2 73 50.7
VMungo0251G3071 Vigna mungo HOM05D006782 ORTHO05D009662 7.2e-11 70.5 85 49.4
Atru.chr6.2152 Acer truncatum HOM05D006782 ORTHO05D009662 9.5e-11 70.1 76 50.0
CiPaw.11G078800 Carya illinoinensis HOM05D006782 ORTHO05D009662 2.8e-10 68.6 77 46.8
Glyma.16G108700 Glycine max HOM05D006782 ORTHO05D009662 6.1e-10 67.4 86 47.7
Sabra01G0179500 Salix brachista HOM05D008950 ORTHO05D009662 1.0e-09 66.6 76 50.0
Thecc.03G320800 Theobroma cacao HOM05D006782 ORTHO05D009662 1.4e-09 66.2 85 41.2
Manes.17G001300 Manihot esculenta HOM05D006782 ORTHO05D009662 1.8e-09 65.9 74 47.3
FvH4_5g24910 Fragaria vesca HOM05D006782 ORTHO05D009662 3.4e-08 61.6 87 36.8
FAN18G2623 Fragaria x ananassa HOM05D006782 ORTHO05D009662 3.4e-08 61.6 87 36.8
FAN04G0916 Fragaria x ananassa HOM05D006782 ORTHO05D009662 4.4e-08 61.2 87 36.8
FAN08G2704 Fragaria x ananassa HOM05D006782 ORTHO05D009662 4.4e-08 61.2 87 36.8
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 4.4e-08 61.2 87 36.8
Haze_07985 Corylus avellana HOM05D006782 ORTHO05D009662 7.5e-08 60.5 88 40.9
Phvul.003G278100 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 2.2e-07 58.9 86 40.7
Cfa021287 Carpinus fangiana HOM05D006782 ORTHO05D009662 6.3e-07 57.4 74 44.6
Nn1g09299 Nelumbo nucifera HOM05D006782 ORTHO05D009662 8.3e-07 57.0 81 39.5
Nn3g19129 Nelumbo nucifera HOM05D006782 ORTHO05D009662 1.8e-06 55.8 74 37.8
Prupe.5G014000 Prunus persica HOM05D006782 ORTHO05D009662 3.1e-06 55.1 85 42.4
QL12p003492 Quercus lobata HOM05D006782 ORTHO05D009662 4.1e-06 54.7 81 34.6
Duzib205G1200 Durio zibethinus HOM05D006782 ORTHO05D009662 5.4e-06 54.3 76 43.4
Hma1.2p1_0262F.1_g105300 Hydrangea macrophylla HOM05D006782 ORTHO05D009662 7.0e-06 53.9 77 36.4


User provided reference genes

Program Settings