Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 5.2e-48 194.5 134 100.0
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 2.3e-35 152.5 134 76.1
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 9.5e-34 147.1 134 75.4
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 1.6e-33 146.4 135 77.0
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 1.3e-30 136.7 134 76.1
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 4.1e-29 131.7 131 76.3
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 9.2e-29 130.6 129 78.3
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 3.5e-28 128.6 133 69.2
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 6.0e-28 127.9 132 69.7
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 6.6e-27 124.4 140 62.9
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 6.6e-27 124.4 133 72.9
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 1.1e-26 123.6 133 71.4
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 1.9e-26 122.9 138 68.1
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.9e-26 122.9 138 68.1
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 7.3e-26 120.9 128 64.8
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 1.2e-25 120.2 130 69.2
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.6e-25 119.8 129 71.3
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 1.6e-25 119.8 129 62.0
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 2.1e-25 119.4 129 70.5
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 1.1e-24 117.1 133 63.2
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.8e-24 116.3 136 64.0
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 1.8e-24 116.3 129 67.4
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.8e-24 116.3 129 62.0
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.3e-24 115.9 128 62.5
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 2.3e-24 115.9 129 67.4
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 3.1e-24 115.5 132 65.9
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 8.9e-24 114.0 131 69.5
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 1.2e-23 113.6 130 69.2
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 1.5e-23 113.2 133 67.7
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 1.5e-23 113.2 133 67.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 2.0e-23 112.8 134 63.4
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 2.0e-23 112.8 130 63.8
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 4.4e-23 111.7 129 69.8
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 4.4e-23 111.7 129 69.8
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 5.8e-23 111.3 129 65.9
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 7.5e-23 110.9 133 63.9
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 2.9e-22 109.0 133 67.7
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 6.4e-22 107.8 130 66.2
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 1.1e-21 107.1 130 62.3
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 1.9e-21 106.3 129 61.2
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.4e-21 105.9 130 61.5
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 3.2e-21 105.5 129 65.9
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 3.2e-21 105.5 128 71.9
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 4.1e-21 105.1 132 64.4
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 7.1e-21 104.4 129 62.0
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 7.1e-21 104.4 139 59.0
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 7.1e-21 104.4 118 68.6
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 9.2e-21 104.0 127 66.1
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 1.2e-20 103.6 134 65.7
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 1.2e-20 103.6 138 58.7
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 1.6e-20 103.2 142 59.9
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 2.1e-20 102.8 130 58.5
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 2.7e-20 102.4 129 68.2
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.0e-19 100.5 130 62.3
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 1.7e-19 99.8 131 61.8
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 1.7e-19 99.8 130 61.5
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 2.3e-19 99.4 129 65.1
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 3.0e-19 99.0 129 60.5
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 3.0e-19 99.0 127 65.4
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 3.9e-19 98.6 131 61.1
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 5.1e-19 98.2 139 58.3
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 5.1e-19 98.2 132 59.8
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 5.1e-19 98.2 130 61.5
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 6.6e-19 97.8 132 63.6
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 6.6e-19 97.8 129 62.8
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 1.5e-18 96.7 129 62.8
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 3.3e-18 95.5 129 64.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 1.6e-17 93.2 136 61.0
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 4.7e-17 91.7 132 61.4
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 6.2e-17 91.3 139 57.6
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 6.2e-17 91.3 139 57.6
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 1.4e-16 90.1 129 58.9
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 1.4e-16 90.1 129 58.9
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 4.0e-16 88.6 133 57.9
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.5e-15 86.7 123 52.8
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 2.0e-15 86.3 128 57.8
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 9.9e-15 84.0 131 58.8
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 9.9e-15 84.0 127 57.5
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 1.3e-14 83.6 130 56.2
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 2.9e-14 82.4 127 52.8
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 3.7e-14 82.0 93 72.0
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.1e-13 80.5 128 58.6
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.9e-13 79.7 160 50.6
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 2.4e-13 79.3 90 64.4
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 1.6e-12 76.6 157 49.7
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 4.6e-12 75.1 96 69.8
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 6.0e-12 74.7 129 58.1
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 1.3e-11 73.6 131 58.0
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 3.9e-11 72.0 98 66.3
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 1.2e-09 67.0 89 67.4
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.6e-09 66.6 92 70.7
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.1e-08 63.9 87 72.4
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 3.1e-08 62.4 96 55.2
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.5e-07 60.1 129 38.0
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 3.4e-07 58.9 90 70.0
MD11G1234100 Malus domestica HOM05D007581 ORTHO05D009250 8.4e-06 54.3 54 51.9


User provided reference genes

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