Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 0.0e+00 1293.9 688 100.0
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 9.0e-229 797.3 702 64.7
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 9.0e-213 744.2 704 60.1
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.0e-200 704.1 701 57.8
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.4e-200 703.7 699 60.4
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 1.1e-199 700.7 700 61.1
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 4.5e-196 688.7 703 56.9
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.9e-194 683.3 700 56.6
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.5e-194 682.9 701 55.6
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 8.8e-192 674.5 701 55.3
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.5e-188 663.7 702 55.7
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.1e-186 657.5 706 54.4
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 9.4e-186 654.4 701 56.8
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 6.7e-184 648.3 712 53.7
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 7.7e-180 634.8 712 51.8
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.2e-172 610.9 696 55.7
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 6.5e-171 605.1 749 50.9
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.2e-169 600.9 725 50.2
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.7e-169 599.7 713 49.9
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 8.0e-169 598.2 726 53.3
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.6e-167 593.2 702 49.9
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.4e-152 544.3 720 47.2
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 3.2e-149 533.1 723 48.5
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.1e-146 524.6 722 46.4
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 6.2e-145 518.8 733 45.0
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 5.2e-144 515.8 721 45.4
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 5.2e-144 515.8 717 46.4
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 2.0e-143 513.8 711 47.1
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 9.8e-143 511.5 766 43.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 1.7e-142 510.8 715 48.0
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 2.1e-140 503.8 717 47.6
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.7e-140 503.4 719 47.4
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.5e-140 503.1 705 46.2
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 6.0e-140 502.3 618 48.9
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 7.8e-140 501.9 724 46.4
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 3.9e-139 499.6 726 45.9
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 4.3e-138 496.1 714 47.3
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.2e-137 494.6 705 44.4
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 3.6e-137 493.0 652 47.9
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.2e-137 492.3 712 46.8
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.4e-136 491.1 714 45.0
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.3e-136 490.3 721 45.6
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.1e-136 490.0 719 46.3
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 4.0e-136 489.6 709 46.0
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.2e-135 488.0 697 45.9
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 3.4e-135 486.5 663 48.6
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.4e-135 486.1 698 45.8
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.9e-134 483.4 708 47.2
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.9e-134 482.6 725 45.7
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 1.1e-133 481.5 725 43.9
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.9e-133 480.7 723 47.2
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.2e-132 478.0 720 45.1
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 2.7e-132 476.9 722 43.9
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.6e-132 476.1 704 44.0
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.7e-131 474.2 720 44.9
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-131 474.2 716 45.9
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.0e-131 473.4 699 45.2
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 2.1e-129 467.2 726 45.9
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.8e-128 462.2 714 45.7
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-127 461.1 714 45.2
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 8.4e-126 455.3 725 44.6
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 1.4e-125 454.5 741 42.9
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.9e-125 454.1 721 45.5
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-123 448.4 704 45.0
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.5e-122 443.7 724 45.0
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.8e-120 437.6 718 44.0
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 5.3e-120 436.0 636 44.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.3e-118 431.4 772 39.9
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.9e-118 430.3 627 48.0
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 2.9e-118 430.3 718 40.7
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.7e-116 423.7 625 46.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 3.9e-115 419.9 717 39.9
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 5.1e-115 419.5 726 41.0
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.5e-114 417.2 680 42.8
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 3.6e-113 413.3 721 40.5
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 6.2e-113 412.5 833 38.7
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.1e-112 411.8 711 41.2
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.0e-112 408.7 562 48.2
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 2.6e-111 407.1 730 42.1
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 3.4e-111 406.8 723 39.7
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 6.4e-110 402.5 801 38.5
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.4e-109 401.4 718 40.0
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.9e-109 401.0 714 39.2
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 2.5e-106 390.6 675 45.2
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.3e-106 390.2 711 37.4
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 9.6e-106 388.7 525 48.0
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.4e-104 384.0 713 43.2
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.1e-104 383.6 703 37.7
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.5e-103 381.3 793 37.3
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 2.2e-102 377.5 714 38.1
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.7e-99 365.5 723 37.8
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.9e-98 364.4 721 37.6
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 7.4e-98 362.5 629 43.4
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.4e-96 358.2 714 38.2
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 3.4e-95 353.6 696 38.9
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 5.8e-95 352.8 757 36.2
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.0e-94 352.1 694 37.0
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.7e-94 351.3 746 36.9
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.4e-93 348.2 722 36.7
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.9e-93 347.8 730 39.2
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.5e-93 347.4 715 39.0
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 7.1e-93 345.9 685 38.7
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.2e-92 345.1 643 40.7
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.6e-92 344.7 717 38.5
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 2.7e-92 344.0 681 41.6
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 7.9e-92 342.4 704 37.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 6.7e-91 339.3 685 38.8
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 8.7e-91 339.0 679 41.7
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.7e-89 333.6 723 36.2
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 4.8e-89 333.2 677 40.5
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.4e-88 331.6 674 41.4
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 2.4e-88 330.9 671 40.5
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.4e-88 330.9 677 41.8
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 4.1e-88 330.1 480 44.0
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.6e-87 327.4 665 40.9
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.3e-86 325.1 644 37.0
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 2.2e-86 324.3 666 41.0
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 3.8e-86 323.6 677 41.1
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.9e-85 321.2 775 33.5
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.9e-85 321.2 672 40.5
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.5e-85 320.9 296 57.4
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 3.2e-85 320.5 673 40.0
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.6e-84 318.2 683 40.0
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 2.7e-84 317.4 632 37.7
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.8e-83 314.7 372 48.4
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.8e-83 314.7 709 33.4
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 3.9e-83 313.5 661 35.2
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 5.1e-83 313.2 681 39.8
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 6.7e-83 312.8 711 34.3
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.1e-82 312.0 583 39.1
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 4.8e-81 306.6 678 39.2
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.3e-80 303.1 716 36.3
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 3.4e-79 300.4 679 39.0
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 4.5e-79 300.1 711 37.6
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.9e-79 299.7 785 31.5
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 7.7e-79 299.3 435 49.4
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.1e-77 295.4 210 71.9
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.1e-76 291.2 652 34.8
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.6e-74 284.3 624 35.9
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 9.7e-74 282.3 296 51.0
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.4e-72 277.7 687 33.6
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.5e-71 273.5 325 49.2
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.6e-68 263.8 248 55.6
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-67 261.9 296 50.7
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.3e-65 255.4 224 58.9
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.8e-64 251.5 579 35.1
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.2e-62 244.6 217 59.4
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 6.5e-62 243.0 563 34.6
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 7.2e-61 239.6 615 34.6
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 9.4e-61 239.2 693 32.5
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.8e-59 235.0 264 48.9
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.4e-56 225.3 225 52.0
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 7.7e-55 219.5 291 41.2
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.0e-51 207.2 201 53.2
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.2e-39 169.1 144 63.2
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.7e-38 165.2 432 31.7
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 8.0e-36 156.4 151 53.6
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.0e-35 154.1 178 52.8
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.4e-34 151.0 216 40.3
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 3.2e-32 144.4 164 53.7
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.5e-29 135.6 130 58.5
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.8e-27 128.6 114 55.3
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.7e-25 122.1 205 40.5
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.6e-23 115.5 98 65.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.3e-22 111.7 229 35.4
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.5e-18 99.0 453 26.7
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 5.4e-16 90.5 477 31.7
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 8.9e-11 73.2 99 43.4
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.4e-10 71.2 365 26.3
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.4e-10 70.9 110 40.9
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 4.6e-07 60.8 184 32.6
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.0e-07 60.5 56 53.6
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.8e-07 60.1 51 54.9


User provided reference genes

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