Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.1e-150 536.6 264 100.0
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 8.3e-82 307.8 272 62.1
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 4.0e-76 288.9 272 59.9
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 3.2e-73 279.3 265 59.6
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 9.8e-67 257.7 257 58.0
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 6.4e-66 255.0 274 54.0
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.9e-65 253.4 271 52.8
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 1.9e-65 253.4 272 55.1
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 2.7e-64 249.6 277 54.5
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.8e-60 236.9 261 51.7
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 5.8e-59 231.9 262 52.7
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 5.2e-44 182.2 165 58.8
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.4e-41 174.1 285 40.7
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.0e-39 167.9 293 39.9
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 1.3e-39 167.5 280 40.4
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 1.7e-39 167.2 215 44.7
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.7e-39 167.2 293 39.9
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 5.1e-39 165.6 288 40.6
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 1.9e-38 163.7 312 37.8
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 2.5e-38 163.3 281 39.5
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 2.5e-38 163.3 267 40.8
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 2.5e-38 163.3 258 41.1
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 3.3e-38 162.9 264 40.5
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.3e-37 161.0 284 37.0
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.3e-37 161.0 263 39.9
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.8e-37 159.8 260 38.8
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 3.6e-37 159.5 294 40.1
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 8.1e-37 158.3 266 39.1
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 3.1e-36 156.4 256 39.5
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 4.0e-36 156.0 280 36.1
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 5.3e-36 155.6 280 39.3
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 5.3e-36 155.6 270 40.4
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 1.2e-35 154.5 284 37.3
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 3.4e-35 152.9 264 39.4
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 5.8e-35 152.1 305 35.7
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 2.9e-34 149.8 279 37.6
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 3.8e-34 149.4 268 39.2
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 6.4e-34 148.7 276 37.0
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 6.4e-34 148.7 290 36.9
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.4e-33 147.5 296 34.1
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 3.2e-33 146.4 269 37.2
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 5.4e-33 145.6 280 35.7
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 5.4e-33 145.6 263 38.8
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.2e-32 144.4 303 32.3
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 1.6e-32 144.1 313 35.1
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 1.6e-32 144.1 294 34.0
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 3.5e-32 142.9 280 37.1
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 1.0e-31 141.4 265 38.1
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 2.3e-31 140.2 275 35.3
Medtr6g040180 Medicago truncatula HOM05D007372 ORTHO05D009318 8.7e-31 138.3 132 59.8
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 3.3e-30 136.3 130 58.5
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 8.1e-29 131.7 145 50.3
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.4e-28 131.0 257 33.9
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 1.4e-28 131.0 259 38.2
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 1.8e-28 130.6 112 62.5
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 3.1e-28 129.8 136 52.9
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 3.1e-28 129.8 144 50.0
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 4.0e-28 129.4 328 32.6
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 4.0e-28 129.4 262 34.4
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 5.3e-28 129.0 146 49.3
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.3e-28 129.0 304 34.2
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 5.8e-27 125.6 200 41.5
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 7.6e-27 125.2 259 35.1
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 7.6e-27 125.2 252 34.5
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.7e-26 124.0 255 36.5
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 2.2e-26 123.6 156 46.8
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 2.2e-26 123.6 282 32.6
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 3.8e-26 122.9 321 32.7
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 6.4e-26 122.1 269 34.2
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 8.4e-26 121.7 206 39.8
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 8.4e-26 121.7 310 30.6
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 5.5e-25 119.0 103 61.2
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 7.1e-25 118.6 111 57.7
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 3.5e-24 116.3 325 31.1
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.0e-23 114.8 216 37.0
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.8e-23 114.0 273 33.3
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 3.9e-23 112.8 304 31.9
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 6.7e-23 112.1 135 44.4
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 6.7e-23 112.1 119 47.9
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.1e-22 111.3 299 30.8
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 3.3e-22 109.8 168 44.6
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 2.1e-21 107.1 154 42.2
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 8.1e-21 105.1 107 55.1
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 8.1e-21 105.1 283 32.2
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 8.1e-21 105.1 320 29.7
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.1e-20 104.8 296 30.4
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 1.1e-20 104.8 105 54.3
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 6.9e-20 102.1 235 33.2
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.2e-19 101.3 182 39.6
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 1.2e-19 101.3 308 28.6
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 3.4e-19 99.8 251 29.9
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 2.5e-17 93.6 213 35.2
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 3.3e-14 83.2 261 30.7
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 4.1e-12 76.3 82 51.2
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 1.5e-11 74.3 151 34.4
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 4.5e-11 72.8 223 30.5
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.2e-10 70.5 82 50.0
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 2.5e-09 67.0 115 37.4
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 3.6e-08 63.2 125 35.2
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 4.3e-06 56.2 175 26.3


User provided reference genes

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