Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 7.0e-49 197.2 117 100.0
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 4.1e-25 118.2 121 59.5
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 3.9e-23 111.7 112 56.2
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 4.3e-22 108.2 118 65.3
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 8.0e-21 104.0 116 53.4
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.3e-20 102.4 121 52.1
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 2.4e-17 92.4 121 60.3
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 3.2e-17 92.0 127 49.6
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 5.4e-17 91.3 120 51.7
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 1.6e-16 89.7 61 72.1
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 2.7e-16 89.0 59 67.8
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 3.5e-16 88.6 60 70.0
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 4.6e-16 88.2 70 64.3
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.3e-15 85.9 67 61.2
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.3e-15 85.9 67 61.2
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 3.0e-15 85.5 68 63.2
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 3.9e-15 85.1 59 64.4
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.9e-15 85.1 64 65.6
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 6.6e-15 84.3 69 59.4
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.1e-14 83.6 59 64.4
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 1.5e-14 83.2 64 62.5
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.9e-14 82.8 63 61.9
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.5e-14 82.4 68 61.8
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 3.3e-14 82.0 59 66.1
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 5.6e-14 81.3 72 54.2
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 7.3e-14 80.9 59 66.1
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 9.5e-14 80.5 61 62.3
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.6e-13 79.7 64 60.9
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 4.7e-13 78.2 64 64.1
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.1e-12 77.0 64 59.4
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 1.1e-12 77.0 83 53.0
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 1.4e-12 76.6 61 59.0
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.4e-12 76.6 62 58.1
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.4e-12 76.6 65 61.5
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 1.8e-12 76.3 82 53.7
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 4.0e-12 75.1 63 58.7
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 6.8e-12 74.3 77 51.9
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 8.9e-12 73.9 63 55.6
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 4.4e-11 71.6 64 54.7
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 4.4e-11 71.6 58 58.6
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 9.9e-11 70.5 84 48.8
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 9.9e-11 70.5 62 56.5
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.3e-10 70.1 107 45.8
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 3.7e-10 68.6 55 58.2
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.7e-10 68.6 65 52.3
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 3.7e-10 68.6 62 58.1
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 3.7e-10 68.6 52 59.6
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 3.7e-10 68.6 66 51.5
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 4.9e-10 68.2 54 59.3
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 4.9e-10 68.2 68 50.0
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.4e-10 67.8 68 50.0
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 8.3e-10 67.4 68 51.5
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 8.3e-10 67.4 68 51.5
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 8.3e-10 67.4 68 51.5
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.1e-09 67.0 49 63.3
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.4e-09 66.6 58 58.6
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.4e-09 66.6 60 56.7
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.4e-09 65.9 53 58.5
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 3.2e-09 65.5 54 57.4
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 4.1e-09 65.1 64 54.7
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.1e-09 65.1 62 53.2
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 5.4e-09 64.7 76 47.4
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 5.4e-09 64.7 68 44.1
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 5.4e-09 64.7 61 50.8
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 7.1e-09 64.3 61 52.5
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 9.2e-09 63.9 70 50.0
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 1.2e-08 63.5 81 50.6
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 1.2e-08 63.5 81 50.6
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.2e-08 63.5 63 50.8
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.6e-08 63.2 59 57.6
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 1.6e-08 63.2 70 48.6
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.7e-08 62.4 81 50.6
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 2.7e-08 62.4 63 57.1
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 2.7e-08 62.4 70 48.6
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 2.7e-08 62.4 62 48.4
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 2.7e-08 62.4 61 52.5
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 3.5e-08 62.0 62 53.2
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 3.5e-08 62.0 56 57.1
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 3.5e-08 62.0 68 48.5
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 4.6e-08 61.6 81 49.4
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 4.6e-08 61.6 81 49.4
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 4.6e-08 61.6 81 49.4
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 6.0e-08 61.2 94 43.6
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 6.0e-08 61.2 61 50.8
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 7.8e-08 60.8 94 41.5
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 7.8e-08 60.8 85 40.0
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 1.0e-07 60.5 73 42.5
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 1.3e-07 60.1 62 53.2
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.0e-07 58.9 61 50.8
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.0e-07 58.9 75 46.7
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 3.9e-07 58.5 81 48.1
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.9e-07 58.5 55 54.5
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 5.1e-07 58.2 51 51.0
TAR629G1767 Trochodendron aralioides HOM05D007413 ORTHO05D009357 5.1e-07 58.2 45 62.2
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 6.6e-07 57.8 59 47.5
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 8.6e-07 57.4 88 43.2
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 1.1e-06 57.0 78 42.3
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 1.1e-06 57.0 79 48.1
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 1.5e-06 56.6 69 47.8
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.5e-06 56.6 75 41.3
Glyma.19G029200 Glycine max HOM05D007413 ORTHO05D009357 3.3e-06 55.5 102 50.0
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 5.6e-06 54.7 40 72.5


User provided reference genes

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