Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0007961 Lotus japonicus HOM05D009308 ORTHO05D011513 6.2e-88 327.4 162 100.0
Lj2g0020728 Lotus japonicus HOM05D009308 ORTHO05D011513 6.0e-83 310.8 162 95.1
Lj2g0018634 Lotus japonicus HOM05D009308 ORTHO05D011513 6.7e-66 254.2 162 81.5
Ca_04389_v3 Cicer arietinum L. HOM05D009308 ORTHO05D011513 2.2e-40 169.5 150 60.7
TPR.G21624 Trifolium pratense HOM05D009308 ORTHO05D011513 8.2e-40 167.5 165 54.5
Psat1g081520 Pisum sativum HOM05D009308 ORTHO05D011513 9.1e-39 164.1 164 58.5
Psat1g081560 Pisum sativum HOM05D009308 ORTHO05D011513 9.1e-39 164.1 164 59.1
Phvul.005G045200 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 4.7e-35 151.8 153 55.6
Medtr6g021830 Medicago truncatula HOM05D009308 ORTHO05D011513 7.9e-35 151.0 159 53.5
Medtr6g021850 Medicago truncatula HOM05D009308 ORTHO05D011513 1.0e-34 150.6 159 52.2
Psat1g082680 Pisum sativum HOM05D009308 ORTHO05D011513 3.0e-34 149.1 147 55.1
VMungo0464G2138 Vigna mungo HOM05D009308 ORTHO05D011513 3.0e-34 149.1 158 57.0
TPR.G21629 Trifolium pratense HOM05D009308 ORTHO05D011513 6.7e-34 147.9 167 53.3
Phvul.004G059800 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 2.6e-33 146.0 163 54.6
VMungo1080G0761 Vigna mungo HOM05D009308 ORTHO05D011513 3.3e-33 145.6 154 53.2
Psat1g081480 Pisum sativum HOM05D009308 ORTHO05D011513 5.7e-33 144.8 159 52.2
Glyma.15G265800 Glycine max HOM05D009308 ORTHO05D011513 2.2e-32 142.9 147 58.5
Glyma.05G114800 Glycine max HOM05D009308 ORTHO05D011513 1.8e-31 139.8 154 53.2
Phvul.004G059900 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 1.8e-31 139.8 158 54.4
Medtr6g021860 Medicago truncatula HOM05D009308 ORTHO05D011513 9.1e-31 137.5 145 55.9
Medtr6g021870 Medicago truncatula HOM05D009308 ORTHO05D011513 9.1e-31 137.5 146 56.2
VMungo0464G0985 Vigna mungo HOM05D009308 ORTHO05D011513 3.5e-30 135.6 161 50.3
Glyma.19G052500 Glycine max HOM05D009308 ORTHO05D011513 4.5e-30 135.2 152 54.6
Glyma.19G052700 Glycine max HOM05D009308 ORTHO05D011513 8.5e-29 131.0 158 50.6
TPR.G21621 Trifolium pratense HOM05D009308 ORTHO05D011513 8.5e-29 131.0 166 50.0
Glyma.19G052600 Glycine max HOM05D009308 ORTHO05D011513 1.9e-28 129.8 159 49.7
Glyma.19G052900 Glycine max HOM05D009308 ORTHO05D011513 2.5e-28 129.4 161 50.9
Medtr6g021900 Medicago truncatula HOM05D009308 ORTHO05D011513 6.1e-27 124.8 159 50.9
Glyma.08G161800 Glycine max HOM05D009308 ORTHO05D011513 8.5e-21 104.4 155 47.1
Psat0s5065g0040 Pisum sativum HOM05D009308 ORTHO05D011513 2.5e-20 102.8 126 47.6
TPR.G320 Trifolium pratense HOM05D009308 ORTHO05D011513 1.4e-18 97.1 111 51.4
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 4.7e-11 72.0 165 33.9
Phvul.004G074900 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 4.0e-10 68.9 161 34.8
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.5e-09 64.7 170 32.9
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 9.8e-09 64.3 182 32.4
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 2.2e-08 63.2 158 31.6
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 2.2e-08 63.2 155 31.0
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 4.9e-08 62.0 176 30.1
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 6.3e-08 61.6 163 31.9
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.3e-08 61.6 198 28.3
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.4e-07 59.7 198 27.8
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 3.1e-07 59.3 183 31.1
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 4.1e-07 58.9 163 30.1
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 1.2e-06 57.4 167 29.9
Manes.10G043800 Manihot esculenta HOM05D010162 ORTHO05D010383 1.6e-06 57.0 170 30.0
Sabra08G0029800 Salix brachista HOM05D031226 ORTHO05D037394 2.0e-06 56.6 162 29.0
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 5.9e-06 55.1 183 24.6
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.7e-06 54.7 77 41.6


User provided reference genes

Program Settings