Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.4e-215 752.7 375 100.0
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.3e-194 682.9 373 88.5
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 5.6e-193 677.6 373 89.0
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.3e-192 676.4 372 89.5
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.1e-192 675.6 374 86.9
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.9e-188 662.5 365 89.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.6e-187 659.4 366 87.2
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.0e-186 656.8 368 88.0
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 3.7e-184 648.3 368 87.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.5e-182 642.9 372 84.4
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 2.6e-174 615.5 369 81.6
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.5e-172 609.0 372 79.6
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 3.2e-172 608.6 372 79.0
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 4.2e-172 608.2 371 79.8
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 5.5e-172 607.8 356 82.6
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 5.5e-172 607.8 397 75.1
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 2.1e-171 605.9 372 79.0
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.4e-170 603.2 364 79.7
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 1.8e-170 602.8 373 79.1
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.3e-170 602.4 372 80.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.3e-170 602.4 364 79.9
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 2.3e-170 602.4 365 81.9
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 3.9e-170 601.7 366 80.6
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 6.7e-170 600.9 368 79.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.5e-169 599.7 361 80.6
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.0e-169 599.4 365 79.7
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 4.4e-169 598.2 366 78.4
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.7e-168 595.1 369 79.9
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 4.8e-168 594.7 372 78.0
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.1e-167 593.6 368 78.0
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.8e-167 592.8 364 78.6
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.5e-166 589.7 362 78.5
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 3.5e-166 588.6 367 77.9
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.9e-166 587.8 364 78.3
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.0e-165 587.0 365 78.6
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.0e-165 587.0 374 75.9
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 5.0e-165 584.7 364 77.2
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 5.0e-165 584.7 365 78.1
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 1.4e-164 583.2 358 79.9
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.2e-163 580.1 414 69.8
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.7e-163 578.9 369 77.8
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.7e-163 578.9 356 78.7
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.0e-162 577.0 368 75.8
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.3e-162 575.9 365 77.8
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.5e-161 573.2 369 75.3
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 5.7e-161 571.2 365 77.8
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.4e-159 566.6 354 77.4
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.4e-159 566.6 365 77.3
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.8e-159 566.2 361 77.0
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 4.1e-159 565.1 360 75.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.5e-158 561.6 352 78.4
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.5e-158 561.6 360 76.4
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.1e-156 557.0 361 75.1
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 1.9e-156 556.2 376 74.5
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 7.2e-156 554.3 376 72.9
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 6.1e-155 551.2 352 75.0
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 8.0e-155 550.8 395 70.4
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.8e-154 549.7 368 74.5
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.6e-153 545.8 361 74.5
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.8e-152 542.3 349 74.8
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 5.9e-150 534.6 318 84.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.9e-148 529.6 352 74.7
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 7.2e-148 527.7 368 69.3
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.0e-146 523.9 349 75.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.8e-146 523.1 389 70.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 7.5e-145 517.7 363 71.9
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.7e-144 516.5 359 73.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.0e-142 509.6 352 70.2
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 6.6e-141 504.6 353 68.0
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.6e-139 500.0 401 64.8
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 9.5e-132 474.2 349 66.2
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 9.5e-132 474.2 349 66.2
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 5.2e-130 468.4 300 79.3
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.5e-129 466.8 363 67.2
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 2.2e-128 463.0 350 69.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 3.1e-122 442.6 349 64.2
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.9e-112 409.5 235 83.4
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 4.6e-110 402.1 232 83.2
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.5e-108 397.1 233 82.8
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.5e-105 387.1 349 57.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 9.3e-103 377.9 274 73.4
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 5.1e-93 345.5 273 64.8
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.3e-91 340.9 209 81.8
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.9e-88 329.7 231 71.4
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 5.8e-81 305.4 174 83.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 2.1e-78 297.0 351 46.2
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 3.4e-65 253.1 202 63.9
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.1e-62 243.8 145 82.8
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 3.5e-49 199.9 151 64.9
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.0e-48 198.4 145 66.2
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.3e-11 75.1 77 54.5


User provided reference genes

Program Settings