Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 1.4e-148 529.6 272 100.0
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 6.7e-119 431.0 272 80.9
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.4e-116 423.3 276 79.7
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 3.4e-115 418.7 272 79.8
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 5.9e-115 417.9 293 75.8
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 5.9e-115 417.9 293 75.8
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.9e-110 402.9 273 77.3
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.5e-110 402.5 275 77.8
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 4.3e-110 401.7 274 77.4
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.5e-107 393.3 274 76.3
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 8.8e-103 377.5 289 69.6
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.3e-101 373.6 275 74.9
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.7e-101 373.2 300 67.7
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.8e-101 372.5 289 70.2
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 6.3e-101 371.3 291 68.7
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.4e-100 370.2 283 68.2
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 5.3e-100 368.2 310 67.4
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.6e-99 365.9 292 67.5
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.0e-98 364.0 287 70.0
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 2.2e-98 362.8 294 66.3
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 6.5e-98 361.3 278 67.6
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.1e-97 360.5 273 69.2
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.1e-97 360.5 274 69.7
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.9e-97 359.8 287 67.2
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 2.5e-97 359.4 292 66.1
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 7.2e-97 357.8 282 68.1
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.4e-97 357.5 286 69.6
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.6e-96 356.7 286 69.6
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.6e-96 356.7 286 69.6
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 4.7e-96 355.1 280 67.5
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 1.0e-95 354.0 284 66.2
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.8e-95 353.2 284 68.0
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 6.7e-95 351.3 278 67.6
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 2.6e-94 349.4 283 69.3
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 5.7e-94 348.2 286 68.5
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 7.4e-94 347.8 281 67.6
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.3e-93 347.1 288 65.3
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 2.2e-93 346.3 292 64.7
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 4.8e-93 345.1 284 66.2
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 6.3e-93 344.7 283 64.3
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 6.3e-93 344.7 311 61.1
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 8.2e-93 344.4 277 68.6
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.1e-92 344.0 287 64.8
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.1e-92 344.0 276 68.8
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.4e-92 343.6 288 64.9
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.4e-92 342.8 292 64.7
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.6e-91 340.1 279 64.9
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 3.5e-91 339.0 286 64.7
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 4.5e-91 338.6 294 65.6
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 5.0e-90 335.1 201 82.1
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 8.5e-90 334.3 275 67.3
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.1e-89 334.0 291 64.3
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 4.2e-89 332.0 273 63.7
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.2e-89 331.3 285 63.2
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.6e-88 330.1 409 50.1
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 8.0e-88 327.8 270 65.9
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.8e-87 326.6 276 64.1
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.8e-87 324.3 274 65.7
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.5e-86 323.6 361 52.9
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.5e-86 323.6 273 65.6
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 5.7e-86 321.6 282 62.1
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 3.7e-85 318.9 271 63.1
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 4.8e-85 318.5 306 58.2
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 4.8e-85 318.5 275 64.4
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.4e-84 317.0 280 61.4
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 4.1e-84 315.5 276 62.7
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.6e-83 313.5 345 54.5
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.0e-83 313.2 197 79.2
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 5.9e-83 311.6 226 70.4
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 5.9e-83 311.6 276 60.5
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.3e-82 310.5 296 60.8
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 2.2e-82 309.7 197 77.2
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.8e-82 308.9 283 59.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 8.5e-82 307.8 281 61.6
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.9e-81 306.6 278 62.2
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.2e-80 303.9 283 62.2
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.6e-80 303.5 291 62.5
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.1e-80 303.1 278 60.1
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.8e-79 300.1 200 74.5
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 4.4e-78 295.4 283 60.1
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.7e-77 293.5 278 59.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 2.2e-77 293.1 198 73.2
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 2.4e-76 289.7 276 59.1
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.4e-76 289.7 270 58.5
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 4.5e-75 285.4 308 55.2
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 7.7e-75 284.6 320 52.5
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.0e-74 284.3 195 79.5
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.7e-74 283.5 266 57.9
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.2e-74 283.1 306 54.6
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 5.0e-74 282.0 296 56.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 5.5e-73 278.5 194 71.6
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.6e-72 276.9 194 70.6
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.1e-72 276.6 271 56.5
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.8e-68 263.5 235 63.0
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 8.6e-66 254.6 154 79.9
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 6.1e-64 248.4 204 60.8
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.0e-63 247.7 314 50.3
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 6.8e-63 245.0 161 80.1
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 7.0e-60 235.0 247 55.5
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.3e-57 226.1 276 50.7
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.1e-52 209.1 131 77.1
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 7.0e-52 208.4 133 78.9
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.1e-48 196.8 224 50.4
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.5e-46 190.7 211 52.1
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.1e-41 174.5 403 36.5
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.7e-40 169.1 109 74.3
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 6.8e-39 165.2 175 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 6.2e-32 142.1 149 52.3
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.7e-27 126.7 80 72.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.1e-25 121.3 96 64.6
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.1e-24 117.1 75 76.0
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 4.5e-22 109.4 221 38.5
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 5.4e-20 102.4 284 32.0
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 7.1e-12 75.5 222 29.7
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 6.7e-10 68.9 61 57.4
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-09 68.2 67 52.2
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.6e-09 65.9 38 81.6
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.6e-08 64.3 37 78.4
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 2.1e-08 63.9 43 69.8
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 6.2e-08 62.4 37 78.4
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 6.2e-08 62.4 33 87.9


User provided reference genes

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