Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 1.2e-79 300.1 188 100.0
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 2.2e-52 209.5 185 67.0
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 1.1e-51 207.2 189 75.1
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 7.0e-51 204.5 191 75.4
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 1.2e-50 203.8 188 67.6
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 1.2e-50 203.8 188 67.6
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 2.7e-50 202.6 188 64.9
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 3.0e-49 199.1 190 71.6
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 8.6e-49 197.6 189 77.2
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 4.0e-46 188.7 188 75.5
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 2.3e-41 172.9 189 59.8
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 2.3e-38 162.9 159 77.4
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 2.3e-33 146.4 198 49.5
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 2.3e-33 146.4 194 50.0
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 3.9e-33 145.6 198 49.0
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.5e-32 143.7 198 49.0
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 2.8e-31 139.4 199 48.7
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 4.7e-31 138.7 197 51.3
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 2.4e-30 136.3 172 52.9
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 5.2e-30 135.2 197 48.7
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 5.2e-30 135.2 198 49.5
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 5.2e-30 135.2 194 48.5
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 1.2e-29 134.0 182 48.9
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 4.4e-29 132.1 122 61.5
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 4.4e-29 132.1 122 61.5
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 4.4e-29 132.1 122 61.5
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 5.8e-29 131.7 135 57.0
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 7.6e-29 131.3 178 50.0
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 9.9e-29 131.0 196 46.4
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.3e-28 130.6 122 60.7
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 1.7e-28 130.2 219 42.9
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.9e-27 126.7 206 43.2
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 3.2e-27 125.9 145 63.4
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 5.4e-27 125.2 122 58.2
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 7.1e-27 124.8 221 42.5
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 2.1e-26 123.2 178 45.5
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 6.0e-26 121.7 177 45.8
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 6.0e-26 121.7 178 45.5
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 7.8e-26 121.3 193 46.1
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 1.0e-25 120.9 176 48.3
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 1.3e-25 120.6 192 44.3
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 3.3e-24 115.9 205 39.5
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 5.6e-24 115.2 205 40.0
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 7.3e-24 114.8 192 44.3
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 1.2e-23 114.0 207 40.6
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 1.6e-23 113.6 192 54.7
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.6e-23 113.6 193 42.0
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 2.1e-23 113.2 175 46.3
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 4.7e-23 112.1 182 44.0
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 6.2e-23 111.7 142 63.4
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.1e-22 110.9 120 50.8
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.1e-22 110.9 79 73.4
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 1.4e-22 110.5 205 42.4
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 1.8e-22 110.2 172 44.8
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.4e-22 109.8 164 43.3
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 3.1e-22 109.4 164 45.7
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 5.2e-22 108.6 83 65.1
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 9.0e-22 107.8 187 40.1
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 3.4e-21 105.9 156 42.9
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 3.4e-21 105.9 176 41.5
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.4e-21 105.9 187 39.6
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 7.6e-21 104.8 200 36.5
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 7.6e-21 104.8 174 40.8
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 9.9e-21 104.4 148 43.9
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 9.9e-21 104.4 191 38.2
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 1.7e-20 103.6 191 43.5
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 3.8e-20 102.4 217 38.7
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 4.9e-20 102.1 166 40.4
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 1.9e-19 100.1 197 36.5
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 1.9e-19 100.1 78 62.8
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 2.4e-19 99.8 167 40.1
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 3.2e-19 99.4 200 38.0
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 9.3e-19 97.8 77 67.5
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 1.6e-18 97.1 85 58.8
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 2.7e-18 96.3 202 39.6
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 4.6e-18 95.5 159 41.5
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 6.0e-18 95.1 130 41.5
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 3.0e-17 92.8 149 45.6
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 5.1e-17 92.0 185 36.8
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.9e-16 90.1 168 42.9
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 2.5e-16 89.7 189 36.5
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 9.6e-16 87.8 81 55.6
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 1.3e-15 87.4 59 78.0
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 8.1e-15 84.7 82 52.4
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 1.4e-14 84.0 161 42.9
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 1.4e-14 84.0 74 54.1
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 1.4e-14 84.0 222 34.7
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 2.4e-14 83.2 50 88.0
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.4e-14 83.2 58 77.6
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 5.3e-14 82.0 172 37.2
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 9.0e-14 81.3 58 75.9
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 5.4e-11 72.0 85 49.4
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 9.3e-11 71.2 55 65.5
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 3.5e-10 69.3 133 39.8
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 1.0e-09 67.8 68 58.8
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.3e-09 66.6 49 67.3
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.3e-09 66.6 49 67.3
PGR031G1183 Punica granatum HOM05D007357 ORTHO05D009314 7.4e-08 61.6 51 62.7
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.7e-07 59.3 141 35.5
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 3.1e-06 56.2 148 31.1
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 9.0e-06 54.7 132 38.6


User provided reference genes

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