Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0005801 Lotus japonicus HOM05D065019 ORTHO05D010633 8.2e-137 491.1 409 100.0
Lj1g0022732 Lotus japonicus HOM05D065019 ORTHO05D010633 1.5e-37 161.4 110 62.7
Glyma.08G336900 Glycine max HOM05D000872 ORTHO05D000777 1.7e-12 78.2 105 38.1
Glyma.20G238351 Glycine max HOM05D011348 ORTHO05D013852 1.4e-11 75.1 99 36.4
Ca_14039_v3 Cicer arietinum L. HOM05D011348 ORTHO05D013852 1.5e-10 71.6 99 37.4
TPR.G39768 Trifolium pratense HOM05D011348 ORTHO05D013852 2.6e-10 70.9 226 24.3
Medtr7g085520 Medicago truncatula HOM05D008380 ORTHO05D010633 1.3e-09 68.6 94 36.2
VMungo1309G0060 Vigna mungo HOM05D008773 ORTHO05D009934 1.4e-08 65.1 111 36.9
Ca_01973_v3 Cicer arietinum L. HOM05D011348 ORTHO05D013852 5.5e-08 63.2 97 34.0
Psat2g144840 Pisum sativum HOM05D008380 ORTHO05D010633 7.2e-08 62.8 93 36.6
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.6e-07 61.6 104 35.6
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.6e-07 61.6 104 35.6
TPR.G9870 Trifolium pratense HOM05D008380 ORTHO05D010633 3.6e-07 60.5 107 32.7
VMungo1383G0517 Vigna mungo HOM05D004090 ORTHO05D002871 6.1e-07 59.7 112 33.0
VMungo0540G1216 Vigna mungo HOM05D008773 ORTHO05D009934 7.9e-07 59.3 112 35.7
VMungo0251G0600 Vigna mungo HOM05D000017 ORTHO05D000013 1.8e-06 58.2 111 36.0
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 2.3e-06 57.8 86 34.9
TPR.G5125 Trifolium pratense HOM05D000011 ORTHO05D000157 3.9e-06 57.0 101 33.7
Dinv28159 Davidia involucrata HOM05D012890 ORTHO05D004107 5.1e-06 56.6 100 32.0


User provided reference genes

Program Settings