Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 0.0e+00 1274.6 680 100.0
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 3.6e-214 748.8 694 64.7
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.6e-209 733.4 692 64.3
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 2.0e-204 716.5 694 59.9
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 7.8e-201 704.5 730 60.3
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 7.8e-201 704.5 730 60.3
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 7.3e-199 698.0 698 58.7
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.9e-194 683.3 704 57.8
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 8.4e-187 657.9 705 58.2
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 7.1e-186 654.8 706 58.1
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 8.1e-182 641.3 721 54.1
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 4.9e-179 632.1 698 56.7
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 1.2e-121 441.4 712 42.6
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.8e-121 440.3 540 51.9
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 6.1e-121 439.1 230 97.4
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 1.4e-120 438.0 721 41.2
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.3e-120 437.2 715 41.4
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 6.8e-120 435.6 679 43.2
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 7.0e-117 425.6 704 40.3
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 7.8e-116 422.2 734 39.6
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 2.5e-114 417.2 763 41.8
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.6e-113 414.5 646 43.7
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.0e-111 407.5 718 39.6
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 4.4e-111 406.4 712 40.0
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.9e-110 403.7 707 39.0
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.9e-110 403.7 726 39.1
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 3.2e-109 400.2 719 38.5
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 9.2e-109 398.7 698 38.4
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 9.2e-109 398.7 690 39.6
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 2.0e-108 397.5 721 41.3
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 3.5e-108 396.7 729 39.4
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 7.3e-106 389.0 712 39.0
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 1.6e-105 387.9 734 38.8
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.1e-105 387.5 712 39.0
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 2.8e-105 387.1 701 37.9
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 2.8e-105 387.1 729 37.9
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 4.4e-103 379.8 702 41.7
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 5.8e-103 379.4 729 37.6
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 7.0e-101 372.5 624 40.2
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 9.2e-101 372.1 690 37.8
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 4.6e-100 369.8 716 39.8
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 2.3e-99 367.5 725 38.2
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 3.3e-98 363.6 660 39.2
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 3.6e-97 360.1 683 39.7
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 5.8e-95 352.8 688 38.4
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 7.5e-95 352.4 701 38.1
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 1.6e-89 334.7 650 38.3
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 1.6e-89 334.7 650 38.3
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 1.6e-89 334.7 650 38.3
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 8.1e-89 332.4 656 37.7
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 1.4e-88 331.6 656 37.8
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 5.2e-88 329.7 713 35.9
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 5.2e-88 329.7 648 37.5
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.6e-87 327.4 678 35.3
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 1.3e-86 325.1 577 39.3
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 1.4e-85 321.6 704 37.1
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 5.4e-85 319.7 918 32.6
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 3.5e-84 317.0 633 34.8
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 6.0e-84 316.2 671 36.7
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.3e-83 314.3 639 36.2
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 3.3e-82 310.5 715 35.0
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 5.6e-82 309.7 720 34.4
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 1.2e-81 308.5 641 36.0
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 2.1e-81 307.8 618 37.7
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 2.8e-81 307.4 471 41.8
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 8.1e-81 305.8 506 38.7
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.4e-80 305.1 717 33.9
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 1.5e-79 301.6 727 31.4
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 2.0e-79 301.2 664 34.8
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 3.8e-78 297.0 766 33.2
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 8.4e-78 295.8 795 34.3
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 8.4e-78 295.8 771 33.7
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.1e-77 295.4 307 53.4
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 4.2e-77 293.5 646 35.6
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 4.6e-76 290.0 659 34.7
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 2.3e-75 287.7 714 34.5
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 3.0e-75 287.3 667 34.6
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 9.6e-74 282.3 623 37.1
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.4e-72 278.5 301 50.2
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 5.8e-71 273.1 584 32.9
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 5.4e-69 266.5 645 31.6
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 1.6e-68 265.0 697 35.4
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 6.0e-68 263.1 745 32.9
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 1.9e-61 241.5 700 32.1
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.6e-60 238.4 721 34.3
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 1.8e-59 235.0 274 47.1
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 1.1e-58 232.3 493 34.1
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 1.5e-55 221.9 644 32.0
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.3e-54 218.8 273 44.0
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 6.5e-54 216.5 711 29.1
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 9.4e-45 186.0 480 28.5
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 4.3e-42 177.2 408 33.8
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 3.4e-39 167.5 157 59.2
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 5.9e-31 140.2 713 23.7
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.8e-27 128.6 150 50.7
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 4.1e-24 117.5 289 31.5
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 2.0e-23 115.2 153 45.1
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 2.6e-23 114.8 161 46.0
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 5.9e-23 113.6 191 36.6
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.2e-20 105.9 133 47.4
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.2e-20 105.9 434 28.8
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 6.8e-19 100.1 374 35.0
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.6e-18 98.2 251 35.1
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 6.3e-17 93.6 323 31.9
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 1.3e-14 85.9 84 64.3
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.5e-14 83.6 293 36.5
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.1e-13 82.8 87 44.8
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 1.2e-12 79.3 521 23.8
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.6e-12 79.0 337 30.0
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.0e-10 72.0 154 44.2
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 1.4e-08 65.9 185 33.5
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 5.4e-08 63.9 254 27.6
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 5.9e-07 60.5 117 33.3
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.0e-06 59.7 274 24.5
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 2.9e-06 58.2 152 32.2


User provided reference genes

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