Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0004548 Lotus japonicus HOM05D000011 ORTHO05D236582 1.4e-63 246.1 124 100.0
Lj2g0012189 Lotus japonicus HOM05D000011 ORTHO05D000157 1.1e-33 146.7 143 58.0
Lj6g0009865 Lotus japonicus HOM05D000011 ORTHO05D000157 2.2e-24 115.9 139 47.5
Lj6g0013296 Lotus japonicus HOM05D000011 ORTHO05D000157 2.2e-21 105.9 143 43.4
TPR.G34804 Trifolium pratense HOM05D000011 ORTHO05D000157 4.4e-09 65.1 155 31.0
Medtr3g056380 Medicago truncatula HOM05D000011 ORTHO05D000157 7.5e-09 64.3 151 27.2
Medtr3g056620 Medicago truncatula HOM05D000011 ORTHO05D000157 9.8e-09 63.9 131 28.2
Medtr3g055930 Medicago truncatula HOM05D000011 ORTHO05D000157 2.2e-08 62.8 151 30.5
Psat5g170640 Pisum sativum HOM05D000011 ORTHO05D000157 6.3e-08 61.2 136 28.7
Medtr3g056190 Medicago truncatula HOM05D000011 ORTHO05D000157 8.3e-08 60.8 129 27.9
Medtr3g056610 Medicago truncatula HOM05D000011 ORTHO05D000157 8.3e-08 60.8 126 27.8
Medtr3g056615 Medicago truncatula HOM05D000011 ORTHO05D000157 8.3e-08 60.8 130 26.2
Medtr3g056320 Medicago truncatula HOM05D000011 ORTHO05D000157 2.4e-07 59.3 155 27.7
Lj5g0024266 Lotus japonicus HOM05D000011 ORTHO05D000157 4.1e-07 58.5 89 43.8
Lj1g0010774 Lotus japonicus HOM05D000011 ORTHO05D000157 5.4e-07 58.2 143 28.0
Lj6g0012314 Lotus japonicus HOM05D000011 ORTHO05D000157 5.4e-07 58.2 83 43.4
Cfa021288 Carpinus fangiana HOM05D000011 ORTHO05D000157 7.0e-07 57.8 69 39.1
Haze_05246 Corylus avellana HOM05D000011 ORTHO05D000157 7.0e-07 57.8 122 30.3
Haze_05827 Corylus avellana HOM05D000011 ORTHO05D000157 7.0e-07 57.8 89 33.7
Lj1g0011206 Lotus japonicus HOM05D000011 ORTHO05D000157 7.0e-07 57.8 123 29.3
Medtr3g056200 Medicago truncatula HOM05D000011 ORTHO05D000157 7.0e-07 57.8 129 24.8
Medtr3g056360 Medicago truncatula HOM05D000011 ORTHO05D000157 7.0e-07 57.8 121 28.9
Medtr3g056410 Medicago truncatula HOM05D000011 ORTHO05D000157 7.0e-07 57.8 121 28.9
TPR.G1956 Trifolium pratense HOM05D000011 ORTHO05D000157 9.2e-07 57.4 147 30.6
Glyma.18G087400 Glycine max HOM05D000011 ORTHO05D000157 1.2e-06 57.0 153 32.0
Medtr3g056590 Medicago truncatula HOM05D000011 ORTHO05D000157 1.2e-06 57.0 151 31.1
Haze_05501 Corylus avellana HOM05D000011 ORTHO05D000157 1.6e-06 56.6 68 38.2
Glyma.18G084400 Glycine max HOM05D000011 ORTHO05D000157 1.6e-06 56.6 153 30.7
Lj6g0004381 Lotus japonicus HOM05D000011 ORTHO05D000157 1.6e-06 56.6 83 42.2
TPR.G1966 Trifolium pratense HOM05D000011 ORTHO05D000157 2.0e-06 56.2 71 33.8
Psat5g171040 Pisum sativum HOM05D000011 ORTHO05D000157 2.7e-06 55.8 128 33.6
TPR.G23600 Trifolium pratense HOM05D000011 ORTHO05D000157 2.7e-06 55.8 92 39.1
Glyma.18G082200 Glycine max HOM05D000011 ORTHO05D000157 3.5e-06 55.5 90 38.9
Medtr3g055830 Medicago truncatula HOM05D000011 ORTHO05D000157 3.5e-06 55.5 104 35.6
VMungo0540G1152 Vigna mungo HOM05D000011 ORTHO05D013381 3.5e-06 55.5 93 34.4
Glyma.18G082100 Glycine max HOM05D000011 ORTHO05D000157 4.5e-06 55.1 154 30.5
Glyma.18G086600 Glycine max HOM05D000011 ORTHO05D000157 4.5e-06 55.1 90 37.8
Glyma.18G088950 Glycine max HOM05D000011 ORTHO05D000157 4.5e-06 55.1 90 37.8
Medtr3g055720 Medicago truncatula HOM05D000011 ORTHO05D000157 4.5e-06 55.1 86 41.9
Ca_20157_v3 Cicer arietinum L. HOM05D000011 ORTHO05D000157 5.9e-06 54.7 98 34.7
Haze_05239 Corylus avellana HOM05D000011 ORTHO05D000157 5.9e-06 54.7 76 34.2
Haze_05831 Corylus avellana HOM05D000011 ORTHO05D000157 5.9e-06 54.7 76 34.2
Haze_18595 Corylus avellana HOM05D000011 ORTHO05D000157 5.9e-06 54.7 97 29.9
Psat5g175560 Pisum sativum HOM05D000011 ORTHO05D005387 5.9e-06 54.7 115 31.3
QL08p002431 Quercus lobata HOM05D000011 ORTHO05D000157 5.9e-06 54.7 87 37.9


User provided reference genes

Program Settings