Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.8e-296 1021.1 497 100.0
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 5.3e-207 724.5 495 73.3
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 3.4e-201 705.3 494 72.1
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.0e-198 696.0 494 71.7
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 4.5e-198 694.9 504 71.8
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 8.0e-195 684.1 498 69.5
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 3.5e-190 668.7 494 69.0
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 3.4e-185 652.1 502 66.5
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 5.9e-182 641.3 501 65.3
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 4.3e-180 635.2 490 65.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 6.4e-168 594.7 502 61.6
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.2e-166 590.5 502 60.4
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.5e-164 582.8 507 60.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 8.1e-163 577.8 481 59.3
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.3e-162 576.2 455 62.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.4e-161 572.0 505 58.8
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.3e-160 570.5 506 58.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 6.4e-160 568.2 512 59.0
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 4.6e-158 562.0 498 58.6
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.0e-157 559.3 496 58.5
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 3.0e-157 559.3 486 57.2
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 5.1e-157 558.5 512 56.8
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.3e-156 555.4 496 58.3
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 7.3e-156 554.7 497 58.6
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 9.6e-156 554.3 479 58.0
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.6e-155 553.5 465 59.6
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-155 553.5 497 58.4
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.6e-155 553.5 515 56.3
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 6.2e-155 551.6 485 57.3
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.4e-154 550.4 474 57.0
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 3.4e-153 545.8 476 57.8
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 4.4e-153 545.4 482 59.5
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 7.6e-153 544.7 506 56.9
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.8e-152 542.3 500 56.4
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.4e-151 540.4 476 57.1
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.2e-150 537.3 498 56.2
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.6e-150 535.4 474 56.8
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.3e-148 528.9 474 56.5
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.6e-147 526.9 499 55.7
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.1e-147 526.6 438 59.8
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 4.8e-147 525.4 463 57.5
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.2e-147 525.0 393 64.4
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.1e-146 524.2 375 63.7
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.1e-146 522.7 435 59.8
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 5.8e-145 518.5 363 66.7
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.3e-144 517.3 499 53.7
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.9e-144 516.2 434 57.1
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.9e-144 516.2 506 53.4
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 8.4e-144 514.6 510 53.1
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 2.4e-143 513.1 519 52.4
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 2.4e-143 513.1 519 52.4
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 3.0e-141 506.1 440 58.0
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 6.6e-141 505.0 514 52.5
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 8.7e-141 504.6 507 52.3
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 2.5e-140 503.1 500 54.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 2.5e-140 503.1 507 52.1
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.3e-140 502.7 479 56.4
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 7.4e-140 501.5 507 52.3
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 7.4e-140 501.5 469 54.8
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.2e-137 494.2 469 55.4
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.4e-137 492.7 500 53.8
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.5e-137 492.3 508 48.8
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.2e-136 490.0 497 53.3
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 4.9e-136 488.8 493 53.5
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 3.2e-135 486.1 497 52.5
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 7.1e-135 485.0 446 56.1
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.3e-135 484.6 497 51.7
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 3.5e-134 482.6 446 55.8
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.5e-134 482.6 497 52.3
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 4.6e-134 482.3 411 57.2
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 7.9e-134 481.5 450 54.7
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.3e-133 480.7 476 54.0
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 3.0e-133 479.6 400 58.0
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 6.7e-133 478.4 421 55.8
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.1e-132 477.6 389 58.6
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.3e-131 474.2 499 50.1
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 4.8e-131 472.2 464 54.1
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 2.4e-130 469.9 419 56.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 5.3e-130 468.8 436 55.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 5.8e-129 465.3 466 53.6
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.3e-128 464.2 427 53.9
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 2.9e-128 463.0 412 54.6
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 6.5e-128 461.8 388 57.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 6.5e-128 461.8 388 57.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 6.5e-128 461.8 388 57.2
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 6.5e-128 461.8 451 53.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 8.4e-128 461.5 437 52.4
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 8.4e-128 461.5 437 55.4
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.9e-127 460.3 464 51.7
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.9e-127 460.3 437 55.1
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 4.2e-127 459.1 416 55.0
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.0e-125 454.5 422 53.6
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.3e-125 454.1 399 56.9
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.6e-123 447.2 507 48.9
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.2e-119 431.8 449 52.3
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 8.7e-117 424.9 497 46.1
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.3e-115 421.0 436 50.5
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.1e-114 417.9 403 53.3
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.9e-97 359.0 427 44.3
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-94 351.3 489 44.4
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.6e-86 324.3 327 53.2
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 4.0e-77 293.1 330 49.7
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 3.7e-75 286.6 393 43.0
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 1.0e-72 278.5 210 61.4
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.3e-71 273.1 261 51.7
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 2.8e-70 270.4 358 43.9
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.0e-68 264.2 473 37.0
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 6.6e-64 249.2 497 34.8
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 3.3e-55 220.3 315 39.7
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.6e-54 218.0 391 37.9
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 7.3e-39 166.0 236 45.8
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 3.3e-31 140.6 112 58.0
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.6e-31 139.0 494 29.1
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 6.2e-30 136.3 136 49.3
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.9e-26 124.8 381 27.3
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 4.6e-25 120.2 129 48.1
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 9.6e-23 112.5 341 30.2
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.1e-22 111.3 423 27.2
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.8e-22 110.9 441 26.8
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.9e-21 106.3 228 33.8
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 3.8e-19 100.5 57 75.4
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 2.5e-07 61.2 81 42.0


User provided reference genes

Program Settings