Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 1.5e-44 182.6 96 100.0
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 5.4e-23 110.9 103 67.0
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 1.0e-21 106.7 103 61.2
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 1.9e-20 102.4 96 63.5
VMungo1215G2475 Vigna mungo HOM05D008334 ORTHO05D010366 6.2e-19 97.4 88 63.6
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 8.9e-18 93.6 103 60.2
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 3.7e-16 88.2 88 59.1
arahy.Tifrunner.gnm1.ann1.HXSC1S Arachis hypogaea HOM05D008334 ORTHO05D010366 1.1e-15 86.7 92 57.6
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 3.9e-13 78.2 105 48.6
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 2.1e-11 72.4 98 51.0
Medtr8g078960 Medicago truncatula HOM05D008334 ORTHO05D010366 3.6e-11 71.6 81 54.3
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 3.6e-11 71.6 98 49.0
VMungo0251G2655 Vigna mungo HOM05D008334 ORTHO05D010366 3.6e-11 71.6 97 48.5
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 5.2e-10 67.8 101 43.6
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 6.8e-10 67.4 96 42.7
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 8.9e-10 67.0 108 45.4
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 8.9e-10 67.0 91 50.5
Phvul.003G249200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 1.5e-09 66.2 94 45.7
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 1.5e-09 66.2 98 40.8
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 2.0e-09 65.9 90 48.9
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 2.0e-09 65.9 89 47.2
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 3.4e-09 65.1 98 40.8
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 3.4e-09 65.1 85 47.1
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 4.4e-09 64.7 100 39.0
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 5.8e-09 64.3 91 42.9
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 9.9e-09 63.5 85 47.1
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 1.3e-08 63.2 88 42.0
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 1.3e-08 63.2 91 40.7
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 1.7e-08 62.8 96 39.6
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 2.2e-08 62.4 90 44.4
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 2.9e-08 62.0 100 42.0
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 2.9e-08 62.0 90 40.0
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 3.8e-08 61.6 90 43.3
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 3.8e-08 61.6 98 42.9
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 4.9e-08 61.2 98 37.8
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 6.4e-08 60.8 76 47.4
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 8.4e-08 60.5 86 40.7
DCAR_010943 Daucus carota HOM05D008334 ORTHO05D010366 1.9e-07 59.3 84 44.0
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.9e-07 59.3 84 44.0
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.9e-07 59.3 84 44.0
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 1.9e-07 59.3 92 40.2
Sopen02g034820 Solanum pennellii HOM05D008334 ORTHO05D010366 2.4e-07 58.9 97 42.3
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 3.2e-07 58.5 86 40.7
arahy.Tifrunner.gnm1.ann1.LQA8Z5 Arachis hypogaea HOM05D008334 ORTHO05D010366 5.4e-07 57.8 92 43.5
Gohir.A11G045200 Gossypium hirsutum HOM05D008334 ORTHO05D010366 7.1e-07 57.4 72 44.4
Gohir.D11G048700 Gossypium hirsutum HOM05D008334 ORTHO05D010366 7.1e-07 57.4 72 44.4
Gorai.007G052300 Gossypium raimondii HOM05D008334 ORTHO05D010366 7.1e-07 57.4 72 44.4
PGSC0003DMG400010112 Solanum tuberosum HOM05D008334 ORTHO05D010366 1.2e-06 56.6 85 44.7
Cpa.g.sc15.75 Carica papaya HOM05D008334 ORTHO05D010366 1.6e-06 56.2 101 43.6
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 2.1e-06 55.8 91 40.7
Sp2g29680 Schrenkiella parvula HOM05D010741 ORTHO05D012551 7.8e-06 53.9 96 36.5


User provided reference genes

Program Settings