Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 1.2e-98 363.2 188 100.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 9.8e-45 184.1 193 59.6
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 3.9e-41 172.2 186 58.1
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 5.0e-41 171.8 191 55.0
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 7.3e-40 167.9 195 56.4
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 4.0e-38 162.2 197 51.8
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 2.0e-37 159.8 221 48.9
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 9.9e-37 157.5 196 52.6
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 1.7e-36 156.8 190 54.7
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 2.9e-36 156.0 199 53.3
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 3.7e-36 155.6 205 52.2
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 4.1e-35 152.1 200 51.5
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.4e-35 151.8 197 52.3
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.4e-35 151.8 197 51.8
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 9.2e-35 151.0 197 51.8
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.7e-34 149.4 197 51.8
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 1.3e-33 147.1 207 46.9
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 1.7e-33 146.7 197 51.8
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.7e-33 146.7 197 51.8
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.3e-33 146.4 201 46.8
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 3.0e-33 146.0 210 47.6
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 3.9e-33 145.6 201 48.8
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 8.6e-33 144.4 210 50.0
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.1e-32 144.1 201 47.8
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.9e-32 143.3 184 50.0
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 4.3e-32 142.1 218 46.3
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 4.3e-32 142.1 187 47.6
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 9.5e-32 141.0 215 45.6
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 1.2e-31 140.6 181 49.2
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.6e-31 140.2 209 46.9
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.6e-31 140.2 207 46.9
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 2.1e-31 139.8 203 45.8
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 3.6e-31 139.0 185 49.2
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 8.1e-31 137.9 107 63.6
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.1e-30 137.5 168 50.0
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.4e-30 137.1 191 47.6
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 1.8e-30 136.7 168 50.0
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 2.4e-30 136.3 186 48.4
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 4.0e-30 135.6 207 46.4
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 8.9e-30 134.4 214 45.8
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 1.2e-29 134.0 190 48.4
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.2e-29 134.0 165 48.5
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 2.0e-29 133.3 215 43.7
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.6e-29 132.9 212 45.8
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 3.4e-29 132.5 146 49.3
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 3.4e-29 132.5 186 46.8
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 3.4e-29 132.5 101 63.4
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 5.8e-29 131.7 166 45.2
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 5.8e-29 131.7 189 43.9
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 7.6e-29 131.3 195 45.1
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 7.6e-29 131.3 209 43.1
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 4.9e-28 128.6 214 41.6
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 4.9e-28 128.6 177 46.9
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 1.1e-27 127.5 186 43.5
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 1.4e-27 127.1 149 49.0
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.4e-27 127.1 195 46.2
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 2.4e-27 126.3 206 44.7
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 4.1e-27 125.6 198 41.9
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 5.4e-27 125.2 220 41.8
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 7.1e-27 124.8 195 42.6
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 7.1e-27 124.8 198 41.9
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 1.6e-26 123.6 185 45.4
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 1.6e-26 123.6 207 41.1
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 2.1e-26 123.2 203 43.3
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 3.5e-26 122.5 90 63.3
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 3.5e-26 122.5 217 40.6
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 4.6e-26 122.1 206 44.2
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 4.6e-26 122.1 197 44.2
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 7.8e-26 121.3 196 42.3
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.0e-25 120.9 195 43.6
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.0e-25 120.9 119 52.1
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.7e-25 120.2 161 47.2
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 1.7e-25 120.2 159 47.2
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.3e-25 119.8 192 43.8
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.3e-25 119.8 94 60.6
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.3e-25 119.8 94 60.6
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 3.0e-25 119.4 219 37.9
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 6.6e-25 118.2 91 61.5
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 6.6e-25 118.2 91 61.5
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 8.6e-25 117.9 194 41.8
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-25 117.9 216 39.4
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 1.9e-24 116.7 219 37.0
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 1.9e-24 116.7 91 60.4
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 2.5e-24 116.3 222 42.8
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 4.3e-24 115.5 218 39.9
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 4.3e-24 115.5 219 39.7
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 1.2e-23 114.0 212 39.2
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 1.2e-23 114.0 212 39.2
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 2.1e-23 113.2 222 40.1
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 3.6e-23 112.5 218 39.4
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 3.6e-23 112.5 218 39.4
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 3.6e-23 112.5 218 39.4
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 3.6e-23 112.5 218 39.4
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 4.7e-23 112.1 208 38.5
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 4.7e-23 112.1 206 38.3
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 6.2e-23 111.7 226 38.5
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.1e-22 110.9 90 56.7
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 1.4e-22 110.5 96 55.2
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 1.4e-22 110.5 96 55.2
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 1.4e-22 110.5 96 55.2
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.4e-22 110.5 90 56.7
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 4.0e-22 109.0 234 36.8
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 5.2e-22 108.6 150 44.0
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 6.9e-22 108.2 150 46.0
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 2.6e-21 106.3 218 36.2
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 5.8e-21 105.1 194 36.6
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 9.9e-21 104.4 189 36.5
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 2.2e-20 103.2 156 39.1
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.9e-19 100.1 179 37.4
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 3.5e-18 95.9 209 38.3
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 3.5e-18 95.9 253 32.4
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 8.7e-17 91.3 210 34.8
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.6e-16 88.6 127 39.4
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.0e-13 80.1 74 55.4
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 4.5e-13 79.0 183 35.0
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 9.9e-13 77.8 58 60.3
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 9.9e-13 77.8 58 60.3
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 1.3e-12 77.4 221 32.6
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 5.4e-11 72.0 182 30.2
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 1.2e-10 70.9 198 31.3
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 3.5e-10 69.3 182 30.2
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 4.6e-10 68.9 149 30.9
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 1.0e-09 67.8 225 28.9
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 6.7e-09 65.1 156 34.0
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 6.7e-09 65.1 156 34.0
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 5.3e-06 55.5 65 41.5


User provided reference genes

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