Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0003023 Lotus japonicus HOM05D035369 ORTHO05D000126 9.8e-228 793.1 400 100.0
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 4.5e-63 246.1 539 35.3
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 7.9e-52 208.8 474 33.5
Lj5g0020114 Lotus japonicus HOM05D000003 ORTHO05D000126 1.0e-43 181.8 495 29.3
Lj2g0004758 Lotus japonicus HOM05D000003 ORTHO05D000126 2.1e-36 157.5 157 52.2
Lj2g0005848 Lotus japonicus HOM05D000003 ORTHO05D000126 5.3e-32 142.9 413 28.8
Lj6g0008318 Lotus japonicus HOM05D000003 ORTHO05D000126 3.2e-29 133.7 155 41.9
Lj4g0020141 Lotus japonicus HOM05D000003 ORTHO05D000126 7.2e-29 132.5 155 45.2
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 4.7e-28 129.8 155 43.9
Lj5g0012424 Lotus japonicus HOM05D000003 ORTHO05D000126 3.4e-26 123.6 159 40.3
Lj4g0021772 Lotus japonicus HOM05D000003 ORTHO05D000126 1.0e-22 112.1 377 29.7
Lj1g0014216 Lotus japonicus HOM05D000003 ORTHO05D000126 8.5e-22 109.0 158 38.0
Lj3g0010137 Lotus japonicus HOM05D000003 ORTHO05D000126 1.6e-20 104.8 153 35.9
Lj6g0011198 Lotus japonicus HOM05D000003 ORTHO05D000126 1.0e-19 102.1 158 33.5
Lj1g0012060 Lotus japonicus HOM05D000003 ORTHO05D000126 1.8e-19 101.3 155 34.8
Lj4g0014165 Lotus japonicus HOM05D000003 ORTHO05D000126 8.8e-19 99.0 158 32.9
Lj5g0002959 Lotus japonicus HOM05D000003 ORTHO05D000126 8.8e-19 99.0 158 34.8
Lj4g0022935 Lotus japonicus HOM05D035369 ORTHO05D000126 3.4e-18 97.1 220 29.5
Lj4g0016394 Lotus japonicus HOM05D000003 ORTHO05D000126 1.4e-16 91.7 165 32.1
Lj4g0020325 Lotus japonicus HOM05D035369 ORTHO05D000126 1.4e-16 91.7 101 39.6
Lj2g0012061 Lotus japonicus HOM05D001749 ORTHO05D001632 2.0e-15 87.8 96 40.6
QL05p033866 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-13 81.6 104 38.5
LjContig00201_ERROPOS200000g0010907 Lotus japonicus HOM05D000003 ORTHO05D000126 7.3e-13 79.3 148 30.4
COL.COLO4_06602 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.0e-10 71.2 99 35.4
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 2.0e-10 71.2 90 35.6
Gorai.002G103400 Gossypium raimondii HOM05D000141 ORTHO05D000780 2.0e-10 71.2 102 30.4
Lj1g0013951 Lotus japonicus HOM05D000003 ORTHO05D000126 2.0e-10 71.2 176 33.0
COL.COLO4_36252 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.6e-10 70.9 145 30.3
Gohir.D01G078800 Gossypium hirsutum HOM05D000141 ORTHO05D000780 2.6e-10 70.9 102 30.4
Gohir.A01G094300 Gossypium hirsutum HOM05D000141 ORTHO05D000780 5.7e-10 69.7 102 29.4
Hma1.2p1_1573F.1_g291540 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 5.7e-10 69.7 104 32.7
COL.COLO4_25190 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.5e-10 69.3 145 24.8
COL.COLO4_29560 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.5e-10 69.3 145 27.6
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.5e-10 69.3 97 32.0
Dinv26582 Davidia involucrata HOM05D055339 ORTHO05D000126 9.8e-10 68.9 113 32.7
COL.COLO4_04241 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.7e-09 68.2 124 29.8
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 1.7e-09 68.2 107 33.6
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 1.7e-09 68.2 83 36.1
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 1.7e-09 68.2 83 36.1
Dinv24368 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-09 67.8 89 37.1
COL.COLO4_24494 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.7e-09 67.0 86 39.5
Dinv09809 Davidia involucrata HOM05D000003 ORTHO05D000126 4.9e-09 66.6 88 33.0
COL.COLO4_22912 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.1e-08 65.5 90 38.9
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-08 65.1 78 35.9
Dinv13290 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-08 65.1 87 32.2
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-08 65.1 152 26.3
COL.COLO4_03978 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.8e-08 64.7 97 33.0
COL.COLO4_18925 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.4e-08 64.3 135 26.7
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 2.4e-08 64.3 84 33.3
Dinv08166 Davidia involucrata HOM05D000003 ORTHO05D000126 2.4e-08 64.3 80 37.5
Rhsim10G0077300 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.2e-08 63.9 151 26.5
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 4.1e-08 63.5 87 31.0
Dinv31372 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-08 63.5 87 31.0
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-08 63.5 87 31.0
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.4e-08 63.2 88 37.5
QL08p015957 Quercus lobata HOM05D000003 ORTHO05D000126 5.4e-08 63.2 90 37.8
COL.COLO4_12194 Corchorus olitorius HOM05D000003 ORTHO05D000126 7.0e-08 62.8 97 32.0
Dinv06473 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-08 62.8 139 28.8
Psat1g039760 Pisum sativum HOM05D000003 ORTHO05D000126 9.2e-08 62.4 76 38.2
Rhsim10G0112300 Rhododendron simsii HOM05D000003 ORTHO05D000126 9.2e-08 62.4 152 27.0
COL.COLO4_04595 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.6e-07 61.6 102 31.4
COL.COLO4_13724 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.6e-07 61.6 156 27.6
COL.COLO4_37225 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.6e-07 61.6 95 28.4
QL04p092364 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-07 61.6 78 37.2
QL09p045602 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-07 61.6 118 29.7
COL.COLO4_26026 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.7e-07 60.8 102 29.4
Dinv12507 Davidia involucrata HOM05D022672 ORTHO05D000126 2.7e-07 60.8 111 27.9
Dinv34280 Davidia involucrata HOM05D000003 ORTHO05D000126 2.7e-07 60.8 80 31.2
Oeu027302.1 Olea europaea HOM05D000003 ORTHO05D000126 2.7e-07 60.8 89 29.2
Prupe.1G197400 Prunus persica HOM05D000003 ORTHO05D000126 2.7e-07 60.8 84 34.5
COL.COLO4_12802 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.9e-07 59.7 100 31.0
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 5.9e-07 59.7 74 33.8
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 5.9e-07 59.7 90 31.1
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 7.8e-07 59.3 81 33.3
COL.COLO4_07649 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.0e-06 58.9 142 23.2
QL02p014714 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-06 58.9 83 36.1
Lj2C538T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-06 58.5 66 36.4
QL05p003774 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 58.5 103 32.0
Lj5P270T37 Lonicera japonica HOM05D000003 ORTHO05D000126 1.7e-06 58.2 67 35.8
QL03p012601 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-06 57.8 81 32.1
Atru.chr9.1190 Acer truncatum HOM05D000003 ORTHO05D000126 3.0e-06 57.4 92 31.5
COL.COLO4_38315 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.0e-06 57.4 93 26.9
Sc21g0002580 Simmondsia chinensis HOM05D000003 ORTHO05D000126 3.0e-06 57.4 98 27.6
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.0e-06 56.6 72 34.7
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.0e-06 56.6 91 34.1
Atru.chr3.1908 Acer truncatum HOM05D000003 ORTHO05D000126 8.6e-06 55.8 92 29.3
Lj1P1051T34 Lonicera japonica HOM05D000003 ORTHO05D000126 8.6e-06 55.8 71 39.4
QL06p038048 Quercus lobata HOM05D000029 ORTHO05D001395 8.6e-06 55.8 81 33.3
Rhsim04G0047100 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.6e-06 55.8 197 25.9
TWI38G2234 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 8.6e-06 55.8 99 29.3


User provided reference genes

Program Settings