Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.2e-80 303.1 152 100.0
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 2.3e-60 235.7 153 77.1
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 3.1e-57 225.3 152 72.4
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 5.0e-55 218.0 150 70.7
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 7.2e-54 214.2 152 71.1
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 7.4e-51 204.1 158 68.4
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 2.2e-50 202.6 153 66.0
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.8e-50 202.2 153 69.3
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 8.2e-50 200.7 153 65.4
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 1.4e-41 173.3 154 55.8
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 9.1e-41 170.6 155 58.1
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 5.9e-40 167.9 127 64.6
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 5.9e-40 167.9 132 65.2
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.5e-38 163.3 130 64.6
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 5.5e-38 161.4 150 54.0
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 9.4e-38 160.6 157 55.4
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 4.7e-37 158.3 134 60.4
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.0e-36 157.1 152 55.3
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 8.8e-36 154.1 151 54.3
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 8.8e-36 154.1 96 78.1
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 1.2e-35 153.7 126 62.7
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 2.0e-35 152.9 129 64.3
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 2.6e-35 152.5 96 77.1
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 5.7e-35 151.4 151 54.3
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 5.7e-35 151.4 111 67.6
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 2.2e-34 149.4 156 54.5
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.2e-34 149.4 138 60.9
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 3.7e-34 148.7 89 79.8
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 8.2e-34 147.5 103 74.8
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 8.2e-34 147.5 103 74.8
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 1.8e-33 146.4 156 53.2
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 1.8e-33 146.4 154 53.2
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 3.1e-33 145.6 155 52.3
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 4.1e-33 145.2 154 53.9
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 5.3e-33 144.8 90 72.2
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 7.0e-33 144.4 128 58.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 9.1e-33 144.1 154 49.4
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 2.0e-32 142.9 110 60.0
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.7e-32 142.5 127 60.6
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.5e-32 142.1 152 53.9
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 5.9e-32 141.4 153 51.0
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 7.7e-32 141.0 104 66.3
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 7.7e-32 141.0 153 49.0
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 1.3e-31 140.2 128 56.2
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 1.3e-31 140.2 153 50.3
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-31 140.2 99 70.7
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-31 140.2 99 70.7
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.7e-31 139.8 99 70.7
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.2e-31 139.4 94 70.2
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 2.2e-31 139.4 133 56.4
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 2.2e-31 139.4 89 77.5
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.9e-31 139.0 100 70.0
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 3.8e-31 138.7 94 70.2
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.8e-31 138.7 92 71.7
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 5.0e-31 138.3 151 48.3
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 6.5e-31 137.9 93 73.1
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 6.5e-31 137.9 135 52.6
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 1.1e-30 137.1 152 48.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.1e-30 137.1 92 70.7
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 1.5e-30 136.7 116 62.1
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.9e-30 136.3 87 72.4
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.9e-30 136.3 87 72.4
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 2.5e-30 136.0 117 59.0
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 5.5e-30 134.8 91 68.1
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 7.2e-30 134.4 97 64.9
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.2e-29 133.7 117 59.0
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.2e-29 133.7 122 59.8
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.6e-29 133.3 97 64.9
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.6e-29 133.3 88 70.5
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 1.6e-29 133.3 135 51.1
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 2.1e-29 132.9 99 62.6
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 2.1e-29 132.9 99 62.6
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 2.1e-29 132.9 99 62.6
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 2.7e-29 132.5 154 48.1
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.7e-29 132.5 97 63.9
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.7e-29 132.5 97 63.9
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 3.6e-29 132.1 79 78.5
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 3.6e-29 132.1 114 57.9
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 4.7e-29 131.7 98 62.2
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 6.1e-29 131.3 159 46.5
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 6.1e-29 131.3 111 59.5
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.0e-28 130.6 89 70.8
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.4e-28 130.2 91 69.2
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 2.3e-28 129.4 151 47.0
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 3.0e-28 129.0 162 47.5
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 3.0e-28 129.0 156 46.2
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 5.2e-28 128.3 101 59.4
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 6.8e-28 127.9 75 78.7
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.2e-27 127.1 88 67.0
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 1.2e-27 127.1 88 71.6
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.0e-27 126.3 84 69.0
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 2.3e-20 102.8 103 48.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 3.0e-20 102.4 98 50.0
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 9.8e-19 97.4 99 52.5
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 9.8e-19 97.4 99 52.5
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 1.7e-18 96.7 80 56.2
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 3.1e-17 92.4 85 55.3
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 7.0e-17 91.3 78 53.8
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.9e-14 83.2 89 48.3
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 2.5e-14 82.8 49 77.6
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.1e-09 67.4 59 59.3


User provided reference genes

Program Settings