Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0002413 Lotus japonicus HOM05D000135 ORTHO05D000203 3.6e-39 165.6 187 100.0
Phvul.004G151525 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 8.9e-14 81.3 72 63.9
VMungo0464G2017 Vigna mungo HOM05D000135 ORTHO05D000203 7.6e-13 78.2 75 61.3
Glyma.07G101100 Glycine max HOM05D000135 ORTHO05D000203 3.7e-12 75.9 62 62.9
Glyma.05G245600 Glycine max HOM05D000135 ORTHO05D000203 3.2e-11 72.8 55 67.3
Phvul.002G329300 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 5.4e-11 72.0 56 62.5
Medtr6g079570 Medicago truncatula HOM05D000135 ORTHO05D000203 7.1e-11 71.6 74 55.4
Glyma.08G053500 Glycine max HOM05D000135 ORTHO05D000203 1.2e-10 70.9 54 64.8
Psat1g033200 Pisum sativum HOM05D000135 ORTHO05D000203 1.6e-10 70.5 74 56.8
VMungo0251G3734 Vigna mungo HOM05D000135 ORTHO05D000203 2.7e-10 69.7 74 54.1
Lj4g0017928 Lotus japonicus HOM05D015243 ORTHO05D000203 1.3e-09 67.4 44 72.7
TPR.G1416 Trifolium pratense HOM05D002159 ORTHO05D007297 6.6e-09 65.1 53 56.6
Sed0000275 Sechium edule HOM05D000135 ORTHO05D000203 2.5e-08 63.2 65 50.8
Ca_25313_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 4.3e-08 62.4 73 49.3
Sed0026410 Sechium edule HOM05D000135 ORTHO05D000203 4.3e-08 62.4 48 62.5
CAN.G1129.52 Capsicum annuum HOM05D000135 ORTHO05D000203 9.6e-08 61.2 44 65.9
Ca_17196_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 9.6e-08 61.2 58 56.9
ClCG06G014370 Citrullus lanatus HOM05D000135 ORTHO05D000203 2.1e-07 60.1 65 52.3
MSTRG.4573 Avicennia marina HOM05D000135 ORTHO05D000203 2.8e-07 59.7 45 66.7
AUR62019110 Chenopodium quinoa HOM05D000135 ORTHO05D000203 2.8e-07 59.7 46 58.7
Thecc.03G053900 Theobroma cacao HOM05D000135 ORTHO05D000203 6.2e-07 58.5 48 58.3
TWI81G0515 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 8.1e-07 58.2 42 61.9
COL.COLO4_30130 Corchorus olitorius HOM05D000135 ORTHO05D000203 1.1e-06 57.8 39 69.2
Nn3g18256 Nelumbo nucifera HOM05D000135 ORTHO05D000203 1.4e-06 57.4 49 61.2
SGA_v2.0_scaffold5G02968 Striga asiatica HOM05D000135 ORTHO05D000203 1.8e-06 57.0 54 53.7
Cc04_g06360 Coffea canephora HOM05D000135 ORTHO05D000203 2.4e-06 56.6 45 57.8
COL.COLO4_35380 Corchorus olitorius HOM05D000135 ORTHO05D000203 2.4e-06 56.6 39 66.7
GSVIVG01008421001 Vitis vinifera HOM05D000135 ORTHO05D000203 2.4e-06 56.6 43 65.1
Hma1.2p1_0669F.1_g200160 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 4.0e-06 55.8 53 52.8
Psat7g002360 Pisum sativum HOM05D015243 ORTHO05D000203 4.0e-06 55.8 46 60.9
PGSC0003DMG400005745 Solanum tuberosum HOM05D000135 ORTHO05D000203 5.2e-06 55.5 45 57.8
EL10Ac1g00489 Beta vulgaris HOM05D000135 ORTHO05D000203 6.8e-06 55.1 46 54.3
Cfa019671 Carpinus fangiana HOM05D000135 ORTHO05D000203 6.8e-06 55.1 39 69.2
Peaxi162Scf00207g00006 Petunia axillaris HOM05D000135 ORTHO05D000203 6.8e-06 55.1 46 60.9
Peaxi162Scf00683g00043 Petunia axillaris HOM05D000135 ORTHO05D000203 6.8e-06 55.1 45 57.8
Solyc03g118810.1 Solanum lycopersicum HOM05D000135 ORTHO05D000203 6.8e-06 55.1 45 57.8
Sopen03g037760 Solanum pennellii HOM05D000135 ORTHO05D000203 6.8e-06 55.1 45 57.8
CSS0018159 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 8.9e-06 54.7 42 61.9
Haze_18836 Corylus avellana HOM05D000135 ORTHO05D000203 8.9e-06 54.7 39 66.7


User provided reference genes

Program Settings