Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 7.9e-172 607.1 317 100.0
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 1.1e-133 480.3 321 79.1
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 2.9e-129 465.7 324 77.2
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 3.5e-127 458.8 304 78.3
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 1.2e-124 450.3 320 76.9
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 6.8e-123 444.5 323 75.5
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 4.4e-122 441.8 317 75.4
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 9.8e-122 440.7 319 77.1
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 1.7e-121 439.9 330 74.8
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 1.7e-121 439.9 330 74.8
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 8.3e-121 437.6 319 76.8
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 3.1e-107 392.5 326 67.5
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 4.9e-105 385.2 296 71.6
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 8.4e-105 384.4 296 70.6
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 8.4e-105 384.4 325 67.7
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 4.1e-104 382.1 326 66.3
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 2.7e-103 379.4 278 71.9
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 2.7e-103 379.4 246 79.3
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.5e-103 379.0 243 79.8
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.7e-102 376.7 246 78.9
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 2.3e-102 376.3 245 79.2
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 5.1e-102 375.2 327 64.5
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 6.6e-102 374.8 289 69.6
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 1.5e-101 373.6 323 64.7
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 3.3e-101 372.5 318 64.2
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 3.3e-101 372.5 274 72.6
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 5.6e-101 371.7 280 71.1
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 2.8e-100 369.4 252 76.2
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 2.8e-100 369.4 275 70.5
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 8.1e-100 367.9 248 76.2
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.4e-99 367.1 315 65.7
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 3.1e-99 365.9 322 64.9
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 3.1e-99 365.9 327 62.4
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 4.0e-99 365.5 320 63.1
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 4.0e-99 365.5 250 76.4
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 2.0e-98 363.2 309 67.0
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 4.4e-98 362.1 265 71.7
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 5.8e-98 361.7 328 62.5
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.9e-97 359.4 308 63.0
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 1.1e-96 357.5 306 65.0
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 1.4e-96 357.1 324 61.7
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 1.9e-96 356.7 323 64.4
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 5.4e-96 355.1 317 64.0
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.6e-95 353.6 245 74.7
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 2.1e-95 353.2 260 71.5
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.7e-95 352.8 325 60.3
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 6.0e-95 351.7 277 70.8
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.7e-94 350.1 302 63.2
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 1.7e-94 350.1 313 62.3
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 3.9e-94 349.0 330 60.3
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 3.3e-93 345.9 298 66.1
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 9.6e-93 344.4 269 69.5
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 2.1e-92 343.2 261 69.3
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 2.1e-92 343.2 326 58.9
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 2.8e-92 342.8 282 66.0
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 3.6e-92 342.4 284 66.5
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 2.4e-91 339.7 294 62.9
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 2.2e-89 333.2 244 70.9
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 8.4e-89 331.3 244 70.5
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 1.1e-88 330.9 319 59.6
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 1.9e-88 330.1 240 72.1
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 2.4e-88 329.7 244 70.1
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 2.4e-88 329.7 325 59.7
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 9.3e-88 327.8 241 71.0
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 1.2e-87 327.4 229 73.4
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 1.2e-87 327.4 229 73.4
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 6.0e-87 325.1 318 58.8
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 7.9e-87 324.7 229 73.4
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 1.3e-86 323.9 289 62.3
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 1.8e-86 323.6 323 57.9
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 3.9e-86 322.4 304 60.9
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 5.1e-86 322.0 253 66.8
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 6.7e-86 321.6 304 60.9
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 1.1e-85 320.9 294 60.5
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.1e-85 320.9 312 59.9
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 1.5e-85 320.5 263 64.6
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 4.3e-85 318.9 259 65.3
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 4.3e-85 318.9 303 60.1
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 9.6e-85 317.8 259 64.9
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 1.6e-84 317.0 198 80.3
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 4.8e-84 315.5 211 76.3
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 6.2e-84 315.1 254 66.5
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 1.1e-83 314.3 236 69.1
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 1.8e-83 313.5 259 64.9
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 1.8e-83 313.5 272 62.5
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 2.4e-83 313.2 199 76.9
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 2.4e-83 313.2 309 57.0
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 4.0e-83 312.4 278 62.2
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 4.0e-83 312.4 278 62.9
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 5.3e-83 312.0 203 77.8
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 9.0e-83 311.2 281 60.5
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 1.2e-82 310.8 263 63.9
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 2.6e-82 309.7 252 66.3
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 3.8e-81 305.8 271 62.4
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 2.7e-79 299.7 307 54.1
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 3.5e-79 299.3 251 64.5
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 2.3e-78 296.6 251 63.3
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 3.0e-78 296.2 217 73.7
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 3.0e-78 296.2 202 72.8
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 7.4e-77 291.6 252 61.1
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 4.8e-76 288.9 211 72.0
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 6.2e-76 288.5 225 67.6
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 1.4e-75 287.3 298 54.4
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 1.1e-72 277.7 204 68.6
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 1.2e-66 257.7 199 64.3
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 2.5e-61 240.0 211 57.8
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 2.8e-60 236.5 201 67.7
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 5.3e-59 232.3 256 50.4
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 1.0e-57 228.0 200 56.0
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 2.9e-57 226.5 198 55.6
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 2.1e-55 220.3 150 72.0
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 8.8e-54 214.9 205 53.2
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 2.9e-49 199.9 210 54.8
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.7e-36 156.4 110 71.8
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 6.5e-33 145.6 173 49.1
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 4.1e-27 126.3 179 44.7
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.3e-16 89.7 76 61.8
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.2e-15 88.2 76 60.5
DCAR_001229 Daucus carota HOM05D006025 ORTHO05D008547 4.9e-12 76.3 50 76.0
Dinv16285 Davidia involucrata HOM05D000027 ORTHO05D000500 3.3e-08 63.5 38 84.2
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 4.3e-08 63.2 64 57.8


User provided reference genes

Program Settings