Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0002059 Lotus japonicus HOM05D011431 ORTHO05D011469 1.3e-42 176.0 88 100.0
Glyma.02G126200 Glycine max HOM05D059108 ORTHO05D011469 1.8e-20 102.4 95 63.2
Glyma.01G069400 Glycine max HOM05D059108 ORTHO05D011469 1.2e-16 89.7 66 69.7
Dinv16575 Davidia involucrata HOM05D011431 ORTHO05D011469 2.5e-11 72.0 88 43.2
COL.COLO4_27759 Corchorus olitorius HOM05D012046 ORTHO05D011469 9.7e-11 70.1 88 44.3
Dinv15557 Davidia involucrata HOM05D011431 ORTHO05D011469 9.7e-11 70.1 90 43.3
Prupe.1G298400 Prunus persica HOM05D011431 ORTHO05D011469 9.1e-09 63.5 92 48.9
Atru.chr11.1508 Acer truncatum HOM05D011431 ORTHO05D011469 1.5e-08 62.8 77 46.8
Potri.010G135150 Populus trichocarpa HOM05D011431 ORTHO05D011469 1.5e-08 62.8 84 41.7
FvH4_4g28750 Fragaria vesca HOM05D011431 ORTHO05D011469 3.4e-08 61.6 92 39.1
FAN12G4328 Fragaria x ananassa HOM05D011431 ORTHO05D011469 3.4e-08 61.6 92 39.1
FAN07G2570 Fragaria x ananassa HOM05D011431 ORTHO05D011469 5.9e-08 60.8 92 39.1
MD13G1053700 Malus domestica HOM05D011431 ORTHO05D011469 7.7e-08 60.5 96 39.6
Manes.14G092700 Manihot esculenta HOM05D011431 ORTHO05D011469 2.2e-07 58.9 89 38.2
Gohir.D02G090700 Gossypium hirsutum HOM05D012046 ORTHO05D011469 2.9e-07 58.5 88 38.6
BraA09t41649Z Brassica rapa HOM05D011032 ORTHO05D013175 6.5e-07 57.4 85 43.5
FAN22G1102 Fragaria x ananassa HOM05D011431 ORTHO05D011469 6.5e-07 57.4 92 37.0
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 3.2e-06 55.1 84 38.1
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 3.2e-06 55.1 84 38.1
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 3.2e-06 55.1 83 36.1
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 5.5e-06 54.3 86 38.4
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 9.4e-06 53.5 89 38.2
FvH4_6g32510 Fragaria vesca HOM05D011431 ORTHO05D011469 9.4e-06 53.5 49 53.1
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 9.4e-06 53.5 89 38.2
Thecc.02G318500 Theobroma cacao HOM05D012046 ORTHO05D011469 9.4e-06 53.5 88 37.5


User provided reference genes

Program Settings