Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 4.7e-54 214.2 100 100.0
Glyma.11G057400 Glycine max HOM05D007434 ORTHO05D009541 1.3e-22 109.8 101 60.4
Glyma.01G184800 Glycine max HOM05D007434 ORTHO05D009541 2.1e-22 109.0 101 59.4
Lalb_Chr16g0378251 Lupinus albus HOM05D007434 ORTHO05D009541 1.3e-19 99.8 103 55.3
Lalb_Chr16g0378431 Lupinus albus HOM05D007434 ORTHO05D009541 1.3e-19 99.8 103 55.3
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 2.2e-19 99.0 102 55.9
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 1.8e-16 89.4 104 49.0
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.8e-16 89.4 101 51.5
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 8.7e-16 87.0 90 51.1
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 1.9e-15 85.9 90 51.1
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 7.4e-15 84.0 98 52.0
VMungo1083G0001 Vigna mungo HOM05D007434 ORTHO05D009541 4.5e-12 74.7 80 56.2
arahy.Tifrunner.gnm1.ann1.68HAUH Arachis hypogaea HOM05D048825 ORTHO05D009541 5.8e-12 74.3 104 47.1
arahy.Tifrunner.gnm1.ann1.M8F4SW Arachis hypogaea HOM05D048825 ORTHO05D009541 4.9e-11 71.2 90 48.9
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 2.1e-09 65.9 101 43.6
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 2.1e-09 65.9 105 36.2
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 2.7e-09 65.5 91 39.6
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 7.9e-09 63.9 89 42.7
Sed0002185 Sechium edule HOM05D007434 ORTHO05D009541 1.3e-08 63.2 103 40.8
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 1.8e-08 62.8 99 40.4
Cpa.g.sc55.177 Carica papaya HOM05D007434 ORTHO05D009541 2.3e-08 62.4 116 39.7
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 2.3e-08 62.4 99 38.4
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 3.0e-08 62.0 92 43.5
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 3.9e-08 61.6 92 39.1
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 5.1e-08 61.2 107 38.3
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 6.7e-08 60.8 100 34.0
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 6.7e-08 60.8 91 39.6
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 1.5e-07 59.7 102 41.2
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 1.9e-07 59.3 96 33.3
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.9e-07 59.3 90 40.0
FvH4_1g15720 Fragaria vesca HOM05D007434 ORTHO05D009541 2.5e-07 58.9 81 39.5
FAN19G1812 Fragaria x ananassa HOM05D007434 ORTHO05D019139 2.5e-07 58.9 81 39.5
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 2.5e-07 58.9 106 38.7
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 2.5e-07 58.9 98 36.7
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 2.5e-07 58.9 91 37.4
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 3.3e-07 58.5 101 36.6
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 3.3e-07 58.5 100 37.0
Sed0004872 Sechium edule HOM05D007434 ORTHO05D009541 3.3e-07 58.5 92 39.1
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 4.3e-07 58.2 101 38.6
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 5.7e-07 57.8 93 38.7
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 7.4e-07 57.4 94 45.7
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 7.4e-07 57.4 91 37.4
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 9.6e-07 57.0 92 40.2
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 9.6e-07 57.0 104 33.7
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 1.3e-06 56.6 99 38.4
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.3e-06 56.6 103 37.9
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 1.6e-06 56.2 96 35.4
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 1.6e-06 56.2 92 39.1
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 2.1e-06 55.8 101 35.6
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 2.1e-06 55.8 102 36.3
Haze_15425 Corylus avellana HOM05D007434 ORTHO05D009541 2.8e-06 55.5 62 45.2
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 2.8e-06 55.5 96 35.4
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 2.8e-06 55.5 91 37.4
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 2.8e-06 55.5 96 35.4
ClCG01G016720 Citrullus lanatus HOM05D007434 ORTHO05D009541 3.7e-06 55.1 90 37.8
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 4.8e-06 54.7 95 35.8
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 4.8e-06 54.7 96 36.5
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 6.2e-06 54.3 106 37.7
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 8.2e-06 53.9 91 38.5


User provided reference genes

Program Settings