Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0001742 Lotus japonicus HOM05D003265 ORTHO05D003819 7.2e-71 270.4 129 100.0
Lj1g0005050 Lotus japonicus HOM05D003265 ORTHO05D003819 2.9e-56 221.9 121 89.3
VMungo0464G0131 Vigna mungo HOM05D003265 ORTHO05D003819 9.5e-31 137.1 133 54.9
Phvul.004G075600 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 1.1e-23 113.6 101 58.4
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 7.5e-20 100.9 114 44.7
CiPaw.01G276700 Carya illinoinensis HOM05D003265 ORTHO05D003819 2.9e-19 99.0 121 43.0
FAN03G0618 Fragaria x ananassa HOM05D003265 ORTHO05D003819 3.2e-18 95.5 114 44.7
MD07G1179700 Malus domestica HOM05D003265 ORTHO05D003819 5.4e-18 94.7 114 47.4
FvH4_7g20180 Fragaria vesca HOM05D003265 ORTHO05D003819 1.2e-17 93.6 122 41.8
FAN06G2521 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.2e-17 93.6 122 41.8
FAN10G1642 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.6e-17 93.2 124 40.3
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 2.7e-17 92.4 112 45.5
Potri.008G044500 Populus trichocarpa HOM05D003265 ORTHO05D003819 7.8e-17 90.9 122 44.3
FAN06G4411 Fragaria x ananassa HOM05D000122 ORTHO05D003819 3.0e-16 89.0 112 41.1
Cpa.g.sc53.18 Carica papaya HOM05D003265 ORTHO05D003819 2.5e-15 85.9 124 41.9
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 7.3e-15 84.3 89 49.4
Manes.10G042100 Manihot esculenta HOM05D003265 ORTHO05D003819 8.0e-14 80.9 97 45.4
ClCG09G020420 Citrullus lanatus HOM05D003265 ORTHO05D003819 1.1e-13 80.5 118 43.2
Sed0014651 Sechium edule HOM05D003265 ORTHO05D003819 1.4e-13 80.1 122 41.0
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 5.2e-13 78.2 121 41.3
Potri.010G217000 Populus trichocarpa HOM05D003265 ORTHO05D003819 5.8e-12 74.7 96 43.8
Haze_16937 Corylus avellana HOM05D003265 ORTHO05D003819 7.5e-12 74.3 119 38.7
MELO3C025500.2 Cucumis melo HOM05D003265 ORTHO05D003819 9.8e-12 73.9 80 47.5
CsaV3_5G026000 Cucumis sativus L. HOM05D003265 ORTHO05D003819 9.8e-12 73.9 80 47.5
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.7e-11 73.2 128 41.4
Cfa001593 Carpinus fangiana HOM05D003265 ORTHO05D003819 2.2e-11 72.8 123 39.0
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 3.7e-11 72.0 113 41.6
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.1e-10 70.5 118 39.0
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 1.1e-10 70.5 121 39.7
THA.LOC104824221 Tarenaya hassleriana HOM05D003265 ORTHO05D013953 2.0e-09 66.2 86 41.9
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 1.0e-08 63.9 88 44.3
TWI63G0250 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 3.0e-08 62.4 102 39.2
Thhalv10017720m.g Eutrema salsugineum HOM05D013918 ORTHO05D013953 5.6e-07 58.2 88 35.2
Sabra08G0030800 Salix brachista HOM05D003265 ORTHO05D003819 1.2e-06 57.0 80 41.2
A03p21720 Brassica napus HOM05D013918 ORTHO05D013953 4.7e-06 55.1 123 30.9


User provided reference genes

Program Settings