Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0000979 Lotus japonicus HOM05D009465 ORTHO05D012186 1.0e-224 783.1 411 100.0
Glyma.16G211600 Glycine max HOM05D009465 ORTHO05D012186 2.5e-162 575.9 424 73.8
Glyma.09G162300 Glycine max HOM05D009465 ORTHO05D012186 3.3e-162 575.5 424 74.1
Phvul.004G137500 Phaseolus vulgaris HOM05D009465 ORTHO05D012186 5.0e-158 561.6 425 74.1
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 5.5e-157 558.1 425 73.2
arahy.Tifrunner.gnm1.ann1.HHM7P8 Arachis hypogaea HOM05D009465 ORTHO05D012186 4.6e-156 555.1 424 71.7
arahy.Tifrunner.gnm1.ann1.KQ9JXS Arachis hypogaea HOM05D009465 ORTHO05D012186 4.6e-156 555.1 424 71.7
Psat1g121040 Pisum sativum HOM05D009465 ORTHO05D012186 3.0e-155 552.4 425 74.8
Lalb_Chr22g0354041 Lupinus albus HOM05D009465 ORTHO05D012186 1.1e-152 543.9 420 72.1
Ca_25367_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 2.0e-143 513.1 425 69.4
Lalb_Chr14g0370161 Lupinus albus HOM05D009465 ORTHO05D012186 2.6e-143 512.7 412 70.4
TPR.G3721 Trifolium pratense HOM05D009465 ORTHO05D012186 8.5e-142 507.7 424 68.9
Glyma.06G310000 Glycine max HOM05D000005 ORTHO05D000012 2.6e-74 283.5 321 51.4
Lj3g0008516 Lotus japonicus HOM05D000005 ORTHO05D000012 1.7e-73 280.8 325 52.0
Phvul.005G016500 Phaseolus vulgaris HOM05D000005 ORTHO05D012186 3.5e-71 273.1 301 54.8
arahy.Tifrunner.gnm1.ann1.S5VFF6 Arachis hypogaea HOM05D000005 ORTHO05D000012 2.5e-69 266.9 327 48.0
arahy.Tifrunner.gnm1.ann1.5MQ2SU Arachis hypogaea HOM05D000005 ORTHO05D000012 3.1e-67 260.0 327 47.7
Medtr3g012470 Medicago truncatula HOM05D000005 ORTHO05D000012 2.9e-65 253.4 242 58.7
Psat3g161560 Pisum sativum HOM05D009465 ORTHO05D012186 1.1e-61 241.5 244 55.7
Ca_14232_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 1.9e-61 240.7 316 47.2
TPR.G9971 Trifolium pratense HOM05D009465 ORTHO05D012186 9.6e-61 238.4 271 54.2
arahy.Tifrunner.gnm1.ann1.2C57RQ Arachis hypogaea HOM05D000005 ORTHO05D000012 1.0e-49 201.8 244 50.0
Lj2g0014678 Lotus japonicus HOM05D000005 ORTHO05D000012 2.2e-49 200.7 245 50.6
arahy.Tifrunner.gnm1.ann1.F56ZG1 Arachis hypogaea HOM05D000005 ORTHO05D000012 6.5e-49 199.1 243 49.4
TPR.G28367 Trifolium pratense HOM05D009465 ORTHO05D012186 8.4e-49 198.7 254 44.9
Lj2g0012327 Lotus japonicus HOM05D000005 ORTHO05D000012 1.9e-48 197.6 268 44.8
Ca_25368_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 3.2e-48 196.8 314 42.0
Lalb_Chr22g0354031 Lupinus albus HOM05D000005 ORTHO05D000012 4.2e-48 196.4 254 46.9
Ca_25369_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 2.1e-47 194.1 259 44.8
arahy.Tifrunner.gnm1.ann1.RYL35A Arachis hypogaea HOM05D000005 ORTHO05D000012 3.5e-47 193.4 238 47.5
Psat1g120400 Pisum sativum HOM05D000005 ORTHO05D012186 1.3e-46 191.4 245 44.9
arahy.Tifrunner.gnm1.ann1.ID9NSH Arachis hypogaea HOM05D000005 ORTHO05D000012 3.7e-44 183.3 300 40.3
arahy.Tifrunner.gnm1.ann1.GK6QJJ Arachis hypogaea HOM05D001484 ORTHO05D001564 1.1e-43 181.8 298 40.9
TPR.G3228 Trifolium pratense HOM05D009465 ORTHO05D012186 1.1e-43 181.8 212 51.9
arahy.Tifrunner.gnm1.ann1.WVJ4GZ Arachis hypogaea HOM05D000005 ORTHO05D000012 5.3e-43 179.5 240 45.4
arahy.Tifrunner.gnm1.ann1.71Y0FT Arachis hypogaea HOM05D000005 ORTHO05D000012 6.9e-43 179.1 299 40.8
arahy.Tifrunner.gnm1.ann1.MNHF94 Arachis hypogaea HOM05D000005 ORTHO05D000012 6.9e-43 179.1 299 40.8
arahy.Tifrunner.gnm1.ann1.KU4K90 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.8e-41 173.3 240 44.6
arahy.Tifrunner.gnm1.ann1.H8JIAA Arachis hypogaea HOM05D000005 ORTHO05D000012 1.3e-38 164.9 261 44.1
arahy.Tifrunner.gnm1.ann1.HVB0T8 Arachis hypogaea HOM05D000005 ORTHO05D000012 6.7e-38 162.5 232 45.7
arahy.Tifrunner.gnm1.ann1.BXGY4D Arachis hypogaea HOM05D009465 ORTHO05D017464 3.3e-37 160.2 232 40.9
arahy.Tifrunner.gnm1.ann1.0HIU69 Arachis hypogaea HOM05D009465 ORTHO05D012186 1.6e-36 157.9 204 46.1
arahy.Tifrunner.gnm1.ann1.NC3JHS Arachis hypogaea HOM05D000001 ORTHO05D000003 2.2e-36 157.5 204 46.6
arahy.Tifrunner.gnm1.ann1.C97LW1 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-35 152.9 204 44.1
arahy.Tifrunner.gnm1.ann1.N3L79K Arachis hypogaea HOM05D009465 ORTHO05D017464 2.6e-34 150.6 231 39.4
Medtr6g078420 Medicago truncatula HOM05D000005 ORTHO05D000012 7.2e-32 142.5 220 40.9
arahy.Tifrunner.gnm1.ann1.XFY5VA Arachis hypogaea HOM05D000001 ORTHO05D000003 6.1e-31 139.4 169 47.9
arahy.Tifrunner.gnm1.ann1.1EPI1N Arachis hypogaea HOM05D000005 ORTHO05D000012 2.3e-30 137.5 306 34.6
arahy.Tifrunner.gnm1.ann1.ET89BN Arachis hypogaea HOM05D000005 ORTHO05D000012 2.3e-30 137.5 297 36.4
arahy.Tifrunner.gnm1.ann1.68FRR6 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.9e-30 136.7 333 34.5
TPR.G19269 Trifolium pratense HOM05D009465 ORTHO05D017464 2.5e-29 134.0 232 38.8
Psat0s1832g0040 Pisum sativum HOM05D009465 ORTHO05D017464 1.7e-28 131.3 232 37.1
Psat1g120040 Pisum sativum HOM05D009465 ORTHO05D017464 1.7e-28 131.3 232 37.1
arahy.Tifrunner.gnm1.ann1.8EI7FZ Arachis hypogaea HOM05D000007 ORTHO05D000039 1.8e-22 111.3 185 38.9
arahy.Tifrunner.gnm1.ann1.EW42QP Arachis hypogaea HOM05D000005 ORTHO05D000012 6.5e-17 92.8 136 44.9
Ca_25370_v3 Cicer arietinum L. HOM05D009465 ORTHO05D017464 1.5e-16 91.7 135 42.2
VMungo0464G1615 Vigna mungo HOM05D009465 ORTHO05D017464 3.6e-15 87.0 153 39.2
VMungo0464G1659 Vigna mungo HOM05D009465 ORTHO05D012186 2.0e-10 71.2 84 46.4
arahy.Tifrunner.gnm1.ann1.YKF62D Arachis hypogaea HOM05D009465 ORTHO05D012186 5.9e-10 69.7 126 40.5
QL04p053587 Quercus lobata HOM05D000009 ORTHO05D010531 8.5e-09 65.9 226 24.3
Nn4g24733 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.1e-08 65.5 78 46.2
COL.COLO4_16743 Corchorus olitorius HOM05D000030 ORTHO05D034864 5.5e-08 63.2 68 45.6
Medtr6g078790 Medicago truncatula HOM05D009465 ORTHO05D017464 5.5e-08 63.2 85 47.1
Nn5g27667 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.2e-07 62.0 77 44.2
Migut.H02025 Erythranthe guttata HOM05D000030 ORTHO05D000009 8.0e-07 59.3 124 30.6
QL04p053556 Quercus lobata HOM05D000009 ORTHO05D010531 1.0e-06 58.9 313 23.0
SGA_v2.0_scaffold130G34269 Striga asiatica HOM05D000030 ORTHO05D022068 1.4e-06 58.5 127 27.6
COL.COLO4_20093 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.8e-06 58.2 107 38.3
arahy.Tifrunner.gnm1.ann1.MED9K0 Arachis hypogaea HOM05D000007 ORTHO05D000039 3.0e-06 57.4 52 53.8
COL.COLO4_37070 Corchorus olitorius HOM05D000030 ORTHO05D000009 6.8e-06 56.2 58 46.6
Duzib151G0841 Durio zibethinus HOM05D000030 ORTHO05D000009 6.8e-06 56.2 76 39.5
Thecc.04G159700 Theobroma cacao HOM05D000030 ORTHO05D000009 8.8e-06 55.8 58 46.6


User provided reference genes

Program Settings