Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 9.5e-65 250.0 123 100.0
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 8.7e-34 147.1 121 63.6
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 3.7e-32 141.7 122 63.1
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 4.8e-32 141.4 123 65.0
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 1.2e-30 136.7 121 60.3
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 1.6e-27 126.3 125 60.0
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 3.0e-26 122.1 123 57.7
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 3.9e-26 121.7 122 55.7
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 1.1e-25 120.2 122 59.0
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.9e-25 119.4 123 56.1
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 2.5e-20 102.4 116 46.6
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 4.6e-19 98.2 135 45.9
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 9.7e-17 90.5 121 43.8
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 8.2e-16 87.4 102 55.9
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 6.9e-15 84.3 119 44.5
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 6.9e-15 84.3 108 46.3
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 9.1e-15 84.0 118 44.1
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.2e-14 83.6 123 42.3
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 2.6e-14 82.4 121 39.7
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 5.9e-14 81.3 120 41.7
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 2.2e-13 79.3 121 43.8
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 5.0e-13 78.2 114 43.9
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 6.5e-13 77.8 106 42.5
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 8.5e-13 77.4 117 39.3
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 1.4e-12 76.6 113 39.8
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 4.2e-12 75.1 106 41.5
arahy.Tifrunner.gnm1.ann1.S09ETB Arachis hypogaea HOM05D007842 ORTHO05D009661 9.4e-12 73.9 135 39.3
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 2.1e-11 72.8 117 41.0
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 2.1e-11 72.8 118 34.7
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.7e-11 72.4 125 40.0
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 2.7e-11 72.4 118 34.7
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 3.6e-11 72.0 93 44.1
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 4.7e-11 71.6 116 36.2
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.0e-10 70.5 118 38.1
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 1.4e-10 70.1 119 37.0
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 3.9e-10 68.6 121 37.2
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 6.7e-10 67.8 109 36.7
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.1e-09 67.0 118 38.1
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.1e-09 67.0 117 34.2
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 2.6e-09 65.9 119 38.7
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 2.6e-09 65.9 115 36.5
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 3.3e-09 65.5 120 40.0
Lalb_Chr10g0099891 Lupinus albus HOM05D007842 ORTHO05D009661 4.4e-09 65.1 128 42.2
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 1.7e-08 63.2 118 37.3
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 1.7e-08 63.2 124 32.3
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 2.2e-08 62.8 121 33.1
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 2.2e-08 62.8 108 38.0
ECA233G2952 Erigeron canadensis HOM05D007842 ORTHO05D009661 3.7e-08 62.0 132 34.1
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 3.7e-08 62.0 116 39.7
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 1.4e-07 60.1 111 33.3
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 1.4e-07 60.1 125 34.4
Lsat_1_v5_gn_8_38840 Lactuca sativa HOM05D007842 ORTHO05D009661 2.4e-07 59.3 95 41.1
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 4.1e-07 58.5 120 35.8
FvH4_4g27740 Fragaria vesca HOM05D022909 ORTHO05D009661 7.0e-07 57.8 126 35.7
FAN12G3934 Fragaria x ananassa HOM05D022909 ORTHO05D009661 7.0e-07 57.8 126 35.7
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 7.0e-07 57.8 120 34.2
FAN07G2083 Fragaria x ananassa HOM05D022909 ORTHO05D009661 9.1e-07 57.4 132 34.8
Lsat_1_v5_gn_3_59860 Lactuca sativa HOM05D007842 ORTHO05D009661 9.1e-07 57.4 115 33.9
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.5e-06 56.6 126 32.5
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 1.5e-06 56.6 104 35.6
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.6e-06 55.8 125 33.6
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 4.5e-06 55.1 115 33.9
Lsat_1_v5_gn_4_18860 Lactuca sativa HOM05D007842 ORTHO05D009661 4.5e-06 55.1 110 33.6
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 4.5e-06 55.1 123 34.1
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 4.5e-06 55.1 100 34.0
ECA246G3435 Erigeron canadensis HOM05D007842 ORTHO05D009661 5.9e-06 54.7 113 37.2
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 5.9e-06 54.7 110 39.1
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 7.7e-06 54.3 91 35.2


User provided reference genes

Program Settings