Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P996T25 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-78 295.8 137 100.0
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 3.1e-40 168.7 137 62.0
Lj2C996T7 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-34 147.9 144 55.6
Lj2A997G27 Lonicera japonica HOM05D000007 ORTHO05D000039 2.8e-33 145.6 113 61.1
Lj2A996T28 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-31 139.0 119 58.0
Lj2C997T0 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-28 128.6 131 55.0
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 9.4e-21 104.0 142 43.7
Lj1C85T5 Lonicera japonica HOM05D039149 ORTHO05D000039 2.1e-20 102.8 138 44.2
Lj2C989T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-19 100.1 134 44.8
Lj5C842T1 Lonicera japonica HOM05D000007 ORTHO05D000039 2.8e-17 92.4 110 48.2
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-16 90.5 124 44.4
Lj3C660T6 Lonicera japonica HOM05D000007 ORTHO05D000039 1.8e-16 89.7 122 43.4
Lj6C102T0 Lonicera japonica HOM05D000007 ORTHO05D000039 2.4e-16 89.4 112 47.3
Lj5C836T3 Lonicera japonica HOM05D000007 ORTHO05D000039 3.1e-16 89.0 124 43.5
Lj5C836T5 Lonicera japonica HOM05D000007 ORTHO05D000039 9.1e-16 87.4 110 46.4
Lj5P838T12 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-15 87.0 150 36.7
Lj5C747T5 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-14 82.0 120 39.2
Lj5C747T4 Lonicera japonica HOM05D000007 ORTHO05D000039 8.5e-14 80.9 150 34.0
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.4e-13 77.4 94 45.7
Nitab4.5_0000908g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.0e-11 73.9 131 36.6
Nitab4.5_0008218g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.0e-11 73.9 102 39.2
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-11 72.4 133 39.1
Lj2C997T1 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-11 72.4 70 51.4
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 5.2e-11 71.6 133 39.8
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 5.2e-11 71.6 94 37.2
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 6.8e-11 71.2 111 39.6
Peaxi162Scf00803g00535 Petunia axillaris HOM05D000007 ORTHO05D000039 1.2e-10 70.5 103 41.7
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 1.5e-10 70.1 73 43.8
Lju41C12T10 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-10 69.7 90 42.2
Nitab4.5_0000195g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.6e-10 69.3 73 45.2
Peaxi162Scf00458g00008 Petunia axillaris HOM05D000007 ORTHO05D000039 2.6e-10 69.3 110 37.3
Dinv11523 Davidia involucrata HOM05D000007 ORTHO05D000039 4.4e-10 68.6 118 36.4
Peaxi162Scf00700g00332 Petunia axillaris HOM05D000007 ORTHO05D000039 4.4e-10 68.6 116 41.4
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 4.4e-10 68.6 92 40.2
Lj1C724G4 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-10 68.2 80 41.2
Lj7C402T6 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-10 68.2 68 44.1
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 5.7e-10 68.2 76 40.8
Peaxi162Scf00094g02020 Petunia axillaris HOM05D000007 ORTHO05D000039 7.5e-10 67.8 92 41.3
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 9.8e-10 67.4 73 41.1
Nitab4.5_0005962g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.8e-10 67.4 107 39.3
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.7e-09 66.6 115 33.9
Peaxi162Scf00074g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 2.2e-09 66.2 137 33.6
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 2.2e-09 66.2 89 41.6
Peaxi162Scf00700g00341 Petunia axillaris HOM05D000007 ORTHO05D000039 2.8e-09 65.9 76 46.1
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.8e-09 65.9 74 40.5
Sopen00g007910 Solanum pennellii HOM05D000007 ORTHO05D000039 2.8e-09 65.9 74 40.5
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 2.8e-09 65.9 74 40.5
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.8e-09 65.9 77 42.9
CAN.G723.19 Capsicum annuum HOM05D000007 ORTHO05D000039 3.7e-09 65.5 125 36.0
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 3.7e-09 65.5 115 40.0
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 3.7e-09 65.5 75 41.3
Peaxi162Scf00700g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 4.8e-09 65.1 117 38.5
Lj5C746G5 Lonicera japonica HOM05D000007 ORTHO05D000039 6.3e-09 64.7 125 35.2
Peaxi162Scf00700g00311 Petunia axillaris HOM05D000007 ORTHO05D000039 6.3e-09 64.7 84 41.7
Peaxi162Scf00803g00055 Petunia axillaris HOM05D000007 ORTHO05D000039 6.3e-09 64.7 87 43.7
Sopen00g012750 Solanum pennellii HOM05D000007 ORTHO05D000039 8.3e-09 64.3 74 40.5
Actinidia38771 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.1e-08 63.9 99 39.4
Lj5C746T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-08 63.9 125 34.4
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-08 63.9 74 40.5
Sopen04g026400 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-08 63.9 73 41.1
Dinv33763 Davidia involucrata HOM05D000001 ORTHO05D000003 1.4e-08 63.5 124 34.7
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.4e-08 63.5 111 33.3
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.4e-08 63.5 76 42.1
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 2.4e-08 62.8 76 44.7
Peaxi162Scf00481g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 4.1e-08 62.0 93 44.1
Peaxi162Scf01075g00007 Petunia axillaris HOM05D000007 ORTHO05D000039 4.1e-08 62.0 88 40.9
PGSC0003DMG400024831 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.4e-08 61.6 75 41.3
Lj7P401T27 Lonicera japonica HOM05D000007 ORTHO05D000039 7.0e-08 61.2 90 42.2
QL07p003540 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-08 61.2 75 38.7
QL07p003552 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-08 61.2 75 38.7
Peaxi162Scf00362g01132 Petunia axillaris HOM05D000007 ORTHO05D000039 9.1e-08 60.8 87 41.4
Solyc04g063430.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 9.1e-08 60.8 73 41.1
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-07 60.1 123 36.6
Peaxi162Scf00033g00031 Petunia axillaris HOM05D000007 ORTHO05D000039 1.6e-07 60.1 89 39.3
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.6e-07 60.1 74 39.2
Solyc04g064460.2 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.0e-07 59.7 69 43.5
Actinidia27875 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.7e-07 59.3 100 35.0
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-07 59.3 101 32.7
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.5e-07 58.9 92 37.0
Rhsim11G0036300 Rhododendron simsii HOM05D000007 ORTHO05D000039 3.5e-07 58.9 105 38.1
EL10Ac9g23000 Beta vulgaris HOM05D000007 ORTHO05D000039 4.5e-07 58.5 83 39.8
Peaxi162Scf00016g00259 Petunia axillaris HOM05D000007 ORTHO05D000039 4.5e-07 58.5 92 41.3
PGSC0003DMG400040421 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.9e-07 58.2 112 35.7
CAN.G78.127 Capsicum annuum HOM05D000007 ORTHO05D000039 7.7e-07 57.8 115 33.9
AUR62017513 Chenopodium quinoa HOM05D000007 ORTHO05D000039 7.7e-07 57.8 94 37.2
Lj7P401T34 Lonicera japonica HOM05D000007 ORTHO05D000039 7.7e-07 57.8 74 37.8
Ciclev10027392m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.0e-06 57.4 120 35.8
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-06 57.4 115 37.4
Rhsim01G0052200 Rhododendron simsii HOM05D001352 ORTHO05D001354 1.0e-06 57.4 73 41.1
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-06 57.0 89 37.1
PGSC0003DMG400002699 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-06 57.0 77 37.7
Gorai.004G022100 Gossypium raimondii HOM05D000007 ORTHO05D000017 1.7e-06 56.6 83 34.9
Hma1.2p1_3645F.1_g337145 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 1.7e-06 56.6 97 33.0
Hma1.2p1_3645F.1_g337150 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 1.7e-06 56.6 97 33.0
EL10Ac9g22940 Beta vulgaris HOM05D000007 ORTHO05D000039 2.3e-06 56.2 76 42.1
Lju41C12T7 Lonicera japonica HOM05D000007 ORTHO05D000039 2.3e-06 56.2 64 43.8
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.9e-06 55.8 92 35.9
Peaxi162Scf01093g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 2.9e-06 55.8 92 39.1
Rhsim08G0189600 Rhododendron simsii HOM05D000007 ORTHO05D000039 2.9e-06 55.8 105 40.0
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.8e-06 55.5 111 34.2
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 3.8e-06 55.5 89 36.0
Lju41C11T9 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-06 55.5 68 42.6
Nitab4.5_0018243g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.8e-06 55.5 84 38.1
Haze_14482 Corylus avellana HOM05D000007 ORTHO05D000039 5.0e-06 55.1 109 32.1
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 5.0e-06 55.1 88 35.2
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 5.0e-06 55.1 91 35.2
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.0e-06 55.1 90 35.6
AUR62004557 Chenopodium quinoa HOM05D000007 ORTHO05D000039 6.6e-06 54.7 76 36.8
Rhsim03G0245800 Rhododendron simsii HOM05D000007 ORTHO05D013648 6.6e-06 54.7 120 35.0
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.6e-06 54.7 52 50.0
PGSC0003DMG400037627 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.6e-06 54.7 56 48.2
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 8.6e-06 54.3 93 35.5
Gohir.A08G015132 Gossypium hirsutum HOM05D000007 ORTHO05D000017 8.6e-06 54.3 93 31.2
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 8.6e-06 54.3 111 31.5


User provided reference genes

Program Settings