Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P92T86 Lonicera japonica HOM05D003517 ORTHO05D009794 7.3e-53 210.3 107 100.0
Lj2P1233T102 Lonicera japonica HOM05D003517 ORTHO05D009794 2.1e-44 182.2 100 94.0
Lj2P1236T75 Lonicera japonica HOM05D003517 ORTHO05D009794 2.1e-44 182.2 100 94.0
DCAR_032460 Daucus carota HOM05D003517 ORTHO05D009794 1.8e-43 179.1 100 93.0
HanXRQChr00c0234g0572741 Helianthus annuus HOM05D003517 ORTHO05D009794 1.8e-43 179.1 100 93.0
HanXRQChr01g0013411 Helianthus annuus HOM05D003517 ORTHO05D009794 1.8e-43 179.1 100 93.0
HanXRQMTg0579471 Helianthus annuus HOM05D003517 ORTHO05D009794 1.8e-43 179.1 100 93.0
CANSAT16G0040 Cannabis sativa HOM05D003517 ORTHO05D009794 2.4e-43 178.7 100 92.0
ATMG00270 Arabidopsis thaliana HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
BolSC28t60338H Brassica oleracea HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
BolSC28t60397H Brassica oleracea HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
BraSC77t46643Z Brassica rapa HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
CSS0025973 Camellia sinensis var. sinensis HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
CARHR282730 Cardamine hirsuta HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
Sp3g25610 Schrenkiella parvula HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
Solyc00g021630.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 8.9e-43 176.8 100 92.0
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 1.2e-42 176.4 100 91.0
Glyma.08G301000 Glycine max HOM05D003517 ORTHO05D009794 1.2e-42 176.4 100 91.0
Lj5g0026865 Lotus japonicus HOM05D003517 ORTHO05D009794 1.2e-42 176.4 100 91.0
LjContig00439g0001390 Lotus japonicus HOM05D003517 ORTHO05D009794 1.2e-42 176.4 100 91.0
LjContig00446g0016600 Lotus japonicus HOM05D003517 ORTHO05D009794 1.2e-42 176.4 100 91.0
Gohir.A03G108600 Gossypium hirsutum HOM05D003517 ORTHO05D009794 2.6e-42 175.3 100 91.0
SabraMtG0003300 Salix brachista HOM05D003517 ORTHO05D009794 2.6e-42 175.3 100 91.0
Nitab4.5_0000172g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009794 4.4e-42 174.5 99 89.9
RcHm_v2.0_MTg0498991 Rosa chinensis HOM05D003517 ORTHO05D009794 9.9e-42 173.3 100 90.0
Lalb_Chr00c21g0406031 Lupinus albus HOM05D003517 ORTHO05D009794 1.3e-41 172.9 100 89.0
Lalb_Chr00c39g0409031 Lupinus albus HOM05D003517 ORTHO05D009794 1.3e-41 172.9 100 89.0
Lalb_Chr00c39g0409211 Lupinus albus HOM05D003517 ORTHO05D009794 1.3e-41 172.9 100 89.0
Lalb_Chr00c51g0413121 Lupinus albus HOM05D003517 ORTHO05D009794 1.3e-41 172.9 100 89.0
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.3e-41 172.9 100 90.0
Sed0011263 Sechium edule HOM05D003517 ORTHO05D009794 1.7e-41 172.6 100 90.0
Sed0015872 Sechium edule HOM05D003517 ORTHO05D009794 1.7e-41 172.6 100 90.0
Gorai.001G168000 Gossypium raimondii HOM05D003517 ORTHO05D009794 2.2e-41 172.2 100 90.0
HanXRQChr02g0049481 Helianthus annuus HOM05D003517 ORTHO05D009794 6.4e-41 170.6 100 91.0
Aqoxy38s018 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 1.4e-40 169.5 100 88.0
SHI35306 Sapria himalayana HOM05D003517 ORTHO05D009794 1.4e-40 169.5 100 87.0
SHI49089 Sapria himalayana HOM05D003517 ORTHO05D009794 1.4e-40 169.5 100 87.0
SHI53309 Sapria himalayana HOM05D003517 ORTHO05D009794 1.4e-40 169.5 100 87.0
CAN.G1.11 Capsicum annuum HOM05D003517 ORTHO05D009794 9.2e-40 166.8 100 88.0
Nn003s41395 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.2e-39 166.4 100 87.0
Nn1g09965 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.2e-39 166.4 100 87.0
Nn1g10124 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.2e-39 166.4 100 87.0
Gohir.A08G086024 Gossypium hirsutum HOM05D003517 ORTHO05D009794 1.3e-38 162.9 100 84.0
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.3e-38 162.9 100 86.0
CDE02G3221 Ceratophyllum demersum HOM05D003517 ORTHO05D009794 2.3e-38 162.2 100 85.0
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 3.9e-38 161.4 100 85.0
LjContig00315g0004708 Lotus japonicus HOM05D003517 ORTHO05D009794 1.5e-37 159.5 91 90.1
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 3.3e-37 158.3 100 85.0
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.3e-37 157.9 100 82.0
HanXRQChr09g0237761 Helianthus annuus HOM05D003517 ORTHO05D009794 1.9e-29 132.5 71 93.0
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea HOM05D003517 ORTHO05D009794 8.1e-28 127.1 100 73.0
Nitab4.5_0003945g0090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.8e-27 125.9 100 72.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.3e-27 124.4 100 72.0
Nitab4.5_0001152g0960 Nicotiana tabacum HOM05D003517 ORTHO05D009794 9.0e-27 123.6 80 77.5
RhsimMtG0007100 Rhododendron simsii HOM05D003517 ORTHO05D009794 6.4e-25 117.5 61 95.1
Sp5g20260 Schrenkiella parvula HOM05D003517 ORTHO05D009794 1.1e-24 116.7 100 69.0
CsaV3_UNG208670 Cucumis sativus L. HOM05D003517 ORTHO05D009794 1.9e-24 115.9 61 93.4
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 6.0e-23 110.9 100 65.0
CiPaw.05G081600 Carya illinoinensis HOM05D003517 ORTHO05D009794 4.3e-21 104.8 81 69.1
TPR.G40594 Trifolium pratense HOM05D003517 ORTHO05D009794 7.4e-21 104.0 55 92.7
Lsat_1_v5_gn_5_95761 Lactuca sativa HOM05D002069 ORTHO05D009794 9.0e-19 97.1 57 82.5
Nitab4.5_0001152g0550 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.0e-18 95.9 57 84.2
HanXRQChr05g0138851 Helianthus annuus HOM05D003517 ORTHO05D009794 6.4e-17 90.9 48 91.7
Pp3c12_12240 Physcomitrium patens HOM05D003517 ORTHO05D009794 1.6e-15 86.3 100 53.0
Aa31csc798G10 Aethionema arabicum HOM05D003517 ORTHO05D009794 1.6e-12 76.3 61 70.5
Thhalv10029192m.g Eutrema salsugineum HOM05D003517 ORTHO05D009794 1.6e-12 76.3 47 83.0
BraSC159t45725Z Brassica rapa HOM05D003517 ORTHO05D009794 2.2e-09 65.9 34 94.1
TPR.G39738 Trifolium pratense HOM05D003517 ORTHO05D009794 7.1e-08 60.8 34 94.1


User provided reference genes

Program Settings