Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 2.1e-42 175.3 86 100.0
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 5.9e-29 130.6 85 75.3
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 5.0e-28 127.5 83 74.7
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 5.5e-27 124.0 86 70.9
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 2.3e-25 118.6 85 67.1
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 2.3e-25 118.6 85 67.1
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 4.7e-18 94.4 86 52.3
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 6.8e-17 90.5 86 50.0
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 1.3e-12 76.3 75 49.3
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 1.3e-12 76.3 75 48.0
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 2.3e-12 75.5 75 48.0
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 2.9e-12 75.1 75 49.3
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 5.0e-12 74.3 75 50.7
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 5.0e-12 74.3 75 49.3
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 5.0e-12 74.3 75 50.7
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 1.1e-11 73.2 75 45.3
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 9.5e-11 70.1 72 48.6
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 1.6e-10 69.3 72 48.6
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-10 68.6 80 36.2
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-09 65.9 83 34.9
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 2.3e-09 65.5 75 44.0
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 4.0e-09 64.7 85 38.8
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 5.2e-09 64.3 82 36.6
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-09 63.9 85 36.5
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 8.9e-09 63.5 80 37.5
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-08 63.2 82 36.6
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 1.5e-08 62.8 81 37.0
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-08 62.4 82 36.6
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 2.0e-08 62.4 82 36.6
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-08 62.4 81 37.0
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-08 62.0 82 35.4
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-08 62.0 76 35.5
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 3.4e-08 61.6 82 37.8
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-08 61.2 82 36.6
Lsat_1_v5_gn_9_91561 Lactuca sativa HOM05D000005 ORTHO05D000012 5.7e-08 60.8 82 36.6
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 5.7e-08 60.8 80 36.2
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 5.7e-08 60.8 82 36.6
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 7.5e-08 60.5 82 34.1
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 7.5e-08 60.5 80 35.0
MD10G1007300 Malus domestica HOM05D000005 ORTHO05D000012 9.8e-08 60.1 76 38.2
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 9.8e-08 60.1 82 35.4
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 9.8e-08 60.1 80 41.2
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-07 59.3 83 37.3
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 1.7e-07 59.3 82 35.4
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-07 58.5 82 34.1
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-07 58.5 82 35.4
Sc04g0008790 Simmondsia chinensis HOM05D000005 ORTHO05D000012 2.8e-07 58.5 85 37.6
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 4.9e-07 57.8 79 31.6
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 4.9e-07 57.8 81 38.3
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-07 57.4 80 35.0
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-07 57.4 81 37.0
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-07 57.4 85 34.1
MD10G1006800 Malus domestica HOM05D000005 ORTHO05D000012 1.1e-06 56.6 76 35.5
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-06 56.6 81 34.6
PGR102G0368 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-06 56.6 80 40.0
Nn1g01979 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.4e-06 55.5 77 35.1
Dinv25474 Davidia involucrata HOM05D000005 ORTHO05D000012 3.1e-06 55.1 76 36.8
Lj1C229G2 Lonicera japonica HOM05D000005 ORTHO05D017002 3.1e-06 55.1 89 37.1
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 4.1e-06 54.7 80 30.0
HanXRQChr16g0522521 Helianthus annuus HOM05D000005 ORTHO05D000012 4.1e-06 54.7 85 31.8
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-06 54.7 85 32.9
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-06 54.7 82 34.1
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-06 54.7 84 35.7
ECA233G1667 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.4e-06 54.3 86 34.9
CAN.G646.4 Capsicum annuum HOM05D000005 ORTHO05D018852 7.0e-06 53.9 80 31.2
Nn1g09534 Nelumbo nucifera HOM05D000005 ORTHO05D000012 7.0e-06 53.9 83 36.1
PGR004G1672 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-06 53.9 75 33.3
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-06 53.9 85 34.1
AT5G36930 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 9.2e-06 53.5 85 35.3
BcaB03g11975 Brassica carinata HOM05D000005 ORTHO05D000012 9.2e-06 53.5 81 33.3
Duzib212G0801 Durio zibethinus HOM05D000005 ORTHO05D000012 9.2e-06 53.5 89 34.8
FvH4_3g44390 Fragaria vesca HOM05D000005 ORTHO05D000012 9.2e-06 53.5 85 38.8


User provided reference genes

Program Settings