Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 7.0e-37 156.8 78 100.0
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 7.0e-37 156.8 78 100.0
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 9.4e-34 146.4 78 92.3
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 1.8e-32 142.1 78 85.9
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 4.4e-31 137.5 78 84.6
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 7.5e-31 136.7 78 84.6
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 1.3e-30 136.0 78 85.9
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 1.7e-30 135.6 71 93.0
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 1.1e-29 132.9 78 84.6
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 4.1e-29 131.0 74 86.5
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 1.2e-28 129.4 78 80.8
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 1.2e-15 86.3 76 57.9
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 2.9e-14 81.6 76 55.3
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 4.1e-13 77.8 75 54.7
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-12 75.9 78 42.3
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-12 74.7 77 42.9
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-12 73.9 78 39.7
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 5.9e-12 73.9 76 44.7
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 7.8e-12 73.6 77 44.2
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 7.8e-12 73.6 77 42.9
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 1.0e-11 73.2 75 50.7
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-11 73.2 78 42.3
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-11 72.8 78 41.0
Lj5A534G47 Lonicera japonica HOM05D000005 ORTHO05D007073 1.7e-11 72.4 48 66.7
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-11 72.4 77 44.2
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-11 72.4 78 39.7
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-11 71.6 78 39.7
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 5.0e-11 70.9 78 38.5
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 6.6e-11 70.5 76 40.8
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 4.3e-10 67.8 76 42.1
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 5.6e-10 67.4 76 39.5
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 5.6e-10 67.4 76 39.5
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 7.3e-10 67.0 75 49.3
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 3.6e-09 64.7 73 46.6
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-09 64.7 76 36.8
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 4.7e-09 64.3 77 39.0
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 4.7e-09 64.3 69 43.5
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 6.2e-09 63.9 76 39.5
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 8.0e-09 63.5 75 45.3
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 8.0e-09 63.5 75 45.3
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 76 36.8
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 77 39.0
PGR004G1672 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-08 63.2 77 41.6
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-08 63.2 76 36.8
PGR105G0001 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 62.8 75 41.3
Eucgr.C02111 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.3e-08 62.0 77 39.0
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 2.3e-08 62.0 76 35.5
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-08 61.6 76 36.8
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 4.0e-08 61.2 76 32.9
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-08 60.5 70 37.1
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-08 60.5 77 36.4
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 8.9e-08 60.1 76 40.8
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 8.9e-08 60.1 77 35.1
PGR142G3679 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 59.7 76 34.2
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 1.5e-07 59.3 69 37.7
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.0e-07 58.9 73 38.4
Eucgr.C01481 Eucalyptus grandis HOM05D000005 ORTHO05D000239 2.6e-07 58.5 76 42.1
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 3.4e-07 58.2 69 39.1
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 57.8 68 44.1
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 57.8 69 37.7
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 7.5e-07 57.0 77 39.0
Eucgr.C02108 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 93 33.3
Eucgr.H03761 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 77 35.1
Eucgr.B01839 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 56.2 75 41.3
Lj3C215T4 Lonicera japonica HOM05D000005 ORTHO05D000239 1.3e-06 56.2 49 53.1
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-06 55.8 69 34.8
PGR042G3770 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-06 55.5 73 39.7
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.9e-06 55.1 77 35.1
PGR102G0526 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-06 55.1 77 35.1
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 77 35.1
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 77 37.7
HanXRQChr16g0521501 Helianthus annuus HOM05D000005 ORTHO05D000012 3.7e-06 54.7 73 34.2
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 3.7e-06 54.7 84 33.3
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 3.7e-06 54.7 69 37.7
Eucgr.L01088 Eucalyptus grandis HOM05D000005 ORTHO05D035199 4.9e-06 54.3 65 38.5
HanXRQChr15g0465971 Helianthus annuus HOM05D000005 ORTHO05D000012 4.9e-06 54.3 78 30.8
Potri.013G037599 Populus trichocarpa HOM05D000005 ORTHO05D000012 4.9e-06 54.3 76 30.3
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 4.9e-06 54.3 75 33.3
Eucgr.C01928 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 32.9
Eucgr.F02533 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 75 33.3
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 66 43.9
Eucgr.C02570 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 75 36.0
Eucgr.E01803 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 68 36.8
Eucgr.H03694 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 68 41.2
Eucgr.H03746 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 77 33.8


User provided reference genes

Program Settings