Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 1.2e-36 156.0 78 100.0
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 6.1e-33 143.7 78 92.3
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 1.4e-32 142.5 78 89.7
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 1.2e-31 139.4 78 91.0
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 1.5e-31 139.0 78 89.7
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 2.2e-30 135.2 78 85.9
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 2.2e-30 135.2 78 85.9
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 4.1e-29 131.0 78 84.6
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 1.6e-28 129.0 71 91.5
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 2.0e-28 128.6 74 86.5
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 1.3e-27 125.9 78 83.3
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 5.7e-15 84.0 76 56.6
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-13 79.7 77 48.1
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 1.4e-13 79.3 76 53.9
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-13 79.0 77 48.1
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 3.2e-13 78.2 78 48.7
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-13 77.8 77 48.1
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-13 77.8 78 47.4
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 5.4e-13 77.4 77 49.4
Lj5A534G47 Lonicera japonica HOM05D000005 ORTHO05D007073 2.0e-12 75.5 48 77.1
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 3.5e-12 74.7 78 44.9
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 4.6e-12 74.3 75 53.3
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 7.8e-12 73.6 76 46.1
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-11 72.8 78 42.3
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 1.7e-11 72.4 75 49.3
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 2.3e-11 72.0 68 50.0
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-11 71.2 78 42.3
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-11 71.2 78 42.3
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 8.6e-11 70.1 78 41.0
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 8.6e-11 70.1 76 43.4
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 3.3e-10 68.2 76 40.8
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 3.3e-10 68.2 76 43.4
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 76 42.1
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 76 42.1
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 76 44.7
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-09 66.2 77 40.3
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-09 66.2 76 43.4
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 2.1e-09 65.5 70 44.3
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 2.1e-09 65.5 77 42.9
PGR004G1672 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-09 64.7 77 42.9
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 6.2e-09 63.9 76 36.8
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.0e-09 63.5 68 50.0
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 76 39.5
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 76 40.8
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 62.8 76 39.5
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 62.8 77 41.6
PGR105G0001 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-08 61.6 75 42.7
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 4.0e-08 61.2 77 37.7
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 4.0e-08 61.2 69 42.0
Eucgr.C01481 Eucalyptus grandis HOM05D000005 ORTHO05D000239 5.2e-08 60.8 76 43.4
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.2e-08 60.8 77 39.0
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.8e-08 60.5 77 42.9
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-08 60.5 77 41.6
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-08 60.5 69 44.9
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 8.9e-08 60.1 75 44.0
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 59.7 84 39.3
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 1.2e-07 59.7 76 43.4
PGR102G0526 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 59.7 77 40.3
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 59.7 69 42.0
MD10G1007300 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-07 59.3 75 34.7
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.0e-07 58.9 77 42.9
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-07 58.9 75 40.0
Eucgr.B01839 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.4e-07 58.2 75 42.7
Lj3C215T4 Lonicera japonica HOM05D000005 ORTHO05D000239 3.4e-07 58.2 49 59.2
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 3.4e-07 58.2 73 42.5
Eucgr.C02111 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 57.8 77 36.4
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 57.8 69 39.1
PGR142G3679 Punica granatum HOM05D000005 ORTHO05D000012 5.8e-07 57.4 76 35.5
Eucgr.H03761 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.5e-07 57.0 77 37.7
PGR102G0368 Punica granatum HOM05D000005 ORTHO05D000012 7.5e-07 57.0 75 38.7
Eucgr.C01430 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 71 43.7
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 73 37.0
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 9.8e-07 56.6 75 40.0
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 9.8e-07 56.6 75 40.0
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 9.8e-07 56.6 69 42.0
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-06 56.2 75 36.0
Eucgr.A00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-06 55.5 77 36.4
Dinv11663 Davidia involucrata HOM05D000005 ORTHO05D000012 2.9e-06 55.1 76 31.6
PGR044G2177 Punica granatum HOM05D000005 ORTHO05D011898 2.9e-06 55.1 76 38.2
PGR142G2372 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-06 55.1 73 38.4
Eucgr.E01804 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 72 37.5
Eucgr.J01296 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 68 45.6
Eucgr.J01332 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 77 37.7
MD10G1006800 Malus domestica HOM05D000005 ORTHO05D000012 3.7e-06 54.7 75 32.0
Nn1g01979 Nelumbo nucifera HOM05D000005 ORTHO05D000012 4.9e-06 54.3 76 31.6
Eucgr.E01866 Eucalyptus grandis HOM05D000005 ORTHO05D011898 6.4e-06 53.9 77 33.8
Eucgr.E03133 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 70 37.1
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 77 35.1
Eucgr.C01928 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 76 35.5
Eucgr.C02108 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 93 31.2
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 8.3e-06 53.5 69 36.2


User provided reference genes

Program Settings