Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 2.0e-36 155.2 78 100.0
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 9.4e-34 146.4 78 92.3
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 2.7e-33 144.8 78 89.7
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 4.7e-33 144.1 78 89.7
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 1.0e-32 142.9 78 89.7
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 2.3e-32 141.7 78 85.9
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 2.3e-32 141.7 78 85.9
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 4.4e-31 137.5 78 87.2
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 3.7e-30 134.4 74 86.5
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 6.3e-30 133.7 71 90.1
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 5.4e-29 130.6 78 82.1
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 9.8e-15 83.2 76 52.6
Lj5A534G47 Lonicera japonica HOM05D000005 ORTHO05D007073 1.7e-14 82.4 48 81.2
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 6.3e-14 80.5 78 47.4
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-13 79.0 77 46.8
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 2.4e-13 78.6 76 50.0
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-13 78.6 78 44.9
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-13 78.6 77 46.8
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-13 78.6 78 48.7
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 3.2e-13 78.2 78 47.4
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 4.1e-13 77.8 76 47.4
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 5.4e-13 77.4 77 48.1
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-13 77.0 77 46.8
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-13 77.0 78 44.9
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-12 76.3 78 44.9
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 2.0e-12 75.5 78 43.6
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 4.6e-12 74.3 75 49.3
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 4.6e-12 74.3 76 44.7
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 2.9e-11 71.6 75 45.3
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-11 71.2 76 43.4
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-11 71.2 76 43.4
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 6.6e-11 70.5 76 44.7
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 8.6e-11 70.1 76 40.8
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 1.9e-10 68.9 68 48.5
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-10 68.6 77 40.3
PGR004G1672 Punica granatum HOM05D000005 ORTHO05D000012 4.3e-10 67.8 77 42.9
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 77 42.9
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 9.5e-10 66.6 76 36.8
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 9.5e-10 66.6 76 43.4
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-09 65.9 76 39.5
Eucgr.C02111 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.8e-09 65.1 77 40.3
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-09 65.1 76 38.2
PGR105G0001 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-09 65.1 75 42.7
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-09 64.7 77 39.0
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 4.7e-09 64.3 70 44.3
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.2e-09 63.9 68 48.5
PGR142G3679 Punica granatum HOM05D000005 ORTHO05D000012 6.2e-09 63.9 76 38.2
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 77 40.3
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.0e-08 63.2 73 41.1
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 62.8 76 35.5
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 62.8 76 36.8
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 3.1e-08 61.6 76 43.4
Eucgr.B01839 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.0e-08 61.2 75 44.0
Eucgr.H03761 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.0e-08 61.2 77 37.7
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 4.0e-08 61.2 75 41.3
Lj3C215T4 Lonicera japonica HOM05D000005 ORTHO05D000239 6.8e-08 60.5 49 57.1
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 6.8e-08 60.5 69 39.1
Eucgr.C01481 Eucalyptus grandis HOM05D000005 ORTHO05D000239 8.9e-08 60.1 76 40.8
Eucgr.A00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-07 59.7 77 37.7
Eucgr.C02108 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-07 59.7 93 34.4
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-07 59.7 77 40.3
PGR102G0526 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 59.7 77 39.0
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-07 59.7 69 40.6
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-07 59.3 77 36.4
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 1.5e-07 59.3 73 39.7
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-07 58.9 69 37.7
Eucgr.C01928 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-07 58.5 76 36.8
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-07 58.5 77 37.7
Eucgr.C01430 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.4e-07 58.2 70 44.3
Eucgr.L01088 Eucalyptus grandis HOM05D000005 ORTHO05D035199 3.4e-07 58.2 76 31.6
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.4e-07 58.2 77 40.3
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 4.4e-07 57.8 75 37.3
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 4.4e-07 57.8 75 37.3
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 57.8 84 36.9
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.8e-07 57.4 77 35.1
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 5.8e-07 57.4 75 37.3
Eucgr.E01804 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.5e-07 57.0 72 37.5
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 7.5e-07 57.0 69 34.8
Eucgr.C02558 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 75 38.7
Eucgr.C02570 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 75 37.3
Eucgr.E01866 Eucalyptus grandis HOM05D000005 ORTHO05D011898 9.8e-07 56.6 77 33.8
PGR042G3770 Punica granatum HOM05D000005 ORTHO05D000012 9.8e-07 56.6 73 41.1
Eucgr.J01332 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 56.2 77 37.7
SEGI_14433 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.3e-06 56.2 79 40.5
Eucgr.C02718 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-06 55.8 75 38.7
Eucgr.H03746 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-06 55.8 77 33.8
MD10G1007300 Malus domestica HOM05D000005 ORTHO05D000012 1.7e-06 55.8 75 33.3
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-06 55.8 75 37.3
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-06 55.8 69 37.7
Eucgr.E01803 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-06 55.5 72 36.1
Eucgr.F02533 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-06 55.5 75 36.0
Potri.013G037599 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.2e-06 55.5 76 32.9
PGR102G0368 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-06 55.5 75 38.7
Eucgr.H03735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.9e-06 55.1 77 36.4
Eucgr.H03694 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 73 35.6
Eucgr.K01937 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 72 33.3
Eucgr.C00040 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.9e-06 54.3 75 40.0
Eucgr.H03745 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.9e-06 54.3 77 35.1
Eucgr.H03785 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.9e-06 54.3 77 33.8
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 32.9
Eucgr.D02660 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 75 42.7
Eucgr.E01852 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 77 33.8
Eucgr.J01296 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 68 42.6
CiPaw.09G115000 Carya illinoinensis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 74 33.8
Dinv11663 Davidia involucrata HOM05D000005 ORTHO05D000012 8.3e-06 53.5 76 30.3
Eucgr.G00368 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 71 40.8
Eucgr.L00391 Eucalyptus grandis HOM05D000005 ORTHO05D000239 8.3e-06 53.5 75 40.0
Eucgr.L01406 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 77 37.7


User provided reference genes

Program Settings