Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P854T47 Lonicera japonica HOM05D010250 ORTHO05D007073 4.1e-37 157.5 78 100.0
Lj2P878T28 Lonicera japonica HOM05D010250 ORTHO05D007073 1.0e-35 152.9 78 94.9
Lj2P877T30 Lonicera japonica HOM05D010250 ORTHO05D007073 2.7e-33 144.8 78 89.7
Lj2C875T4 Lonicera japonica HOM05D010250 ORTHO05D007073 5.2e-32 140.6 78 88.5
Lj2P857G39 Lonicera japonica HOM05D010250 ORTHO05D007073 5.2e-32 140.6 78 89.7
Lj2P877T50 Lonicera japonica HOM05D010250 ORTHO05D007073 1.2e-31 139.4 78 89.7
Lj2P857T86 Lonicera japonica HOM05D010250 ORTHO05D007073 9.8e-31 136.3 78 84.6
Lj2P879T17 Lonicera japonica HOM05D010250 ORTHO05D007073 9.8e-31 136.3 78 84.6
Lj2P857T65 Lonicera japonica HOM05D010250 ORTHO05D007073 3.7e-30 134.4 78 85.9
Lj2C856T4 Lonicera japonica HOM05D010250 ORTHO05D007073 1.8e-29 132.1 71 91.5
Lj2C875T0 Lonicera japonica HOM05D010250 ORTHO05D007073 2.4e-29 131.7 71 91.5
Lj5A534G47 Lonicera japonica HOM05D000005 ORTHO05D007073 1.4e-16 89.4 49 85.7
Lj9P4T29 Lonicera japonica HOM05D010250 ORTHO05D015109 8.9e-16 86.7 76 55.3
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 1.5e-15 85.9 78 51.3
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 5.7e-15 84.0 78 48.7
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-14 82.4 78 48.7
Lju170P26T30 Lonicera japonica HOM05D010250 ORTHO05D015109 2.2e-14 82.0 76 52.6
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-14 81.6 78 48.7
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 4.9e-14 80.9 78 47.4
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 8.3e-14 80.1 78 50.0
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-13 79.7 76 47.4
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-13 79.7 78 48.7
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-13 79.3 77 49.4
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-13 79.3 77 49.4
Lju1058C1T4 Lonicera japonica HOM05D000005 ORTHO05D015109 1.8e-13 79.0 75 53.3
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-13 79.0 76 48.7
PGR142G1897 Punica granatum HOM05D000005 ORTHO05D000012 2.4e-13 78.6 77 49.4
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 3.2e-13 78.2 76 50.0
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-13 77.0 77 48.1
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-12 75.9 76 47.4
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-12 75.9 76 47.4
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 2.7e-12 75.1 76 46.1
Lj2P912T5 Lonicera japonica HOM05D010250 ORTHO05D015109 5.9e-12 73.9 75 48.0
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-11 72.8 76 40.8
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-11 71.6 77 46.8
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-11 71.6 77 44.2
PGR004G1672 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-11 71.2 77 46.8
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-10 69.7 76 46.1
Lj3P419T6 Lonicera japonica HOM05D010250 ORTHO05D015109 1.9e-10 68.9 75 46.7
PGR142G1610 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-10 68.6 68 50.0
PGR105G0001 Punica granatum HOM05D000005 ORTHO05D000012 3.3e-10 68.2 75 46.7
PGR142G3679 Punica granatum HOM05D000005 ORTHO05D000012 3.3e-10 68.2 76 42.1
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 76 40.8
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 76 42.1
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 7.3e-10 67.0 76 42.1
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-09 65.9 76 38.2
Eucgr.C01481 Eucalyptus grandis HOM05D000005 ORTHO05D000239 2.1e-09 65.5 76 47.4
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 2.8e-09 65.1 69 43.5
Eucgr.C02111 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.6e-09 64.7 77 39.0
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-09 64.7 70 42.9
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.7e-09 64.3 73 41.1
Lj3P470T4 Lonicera japonica HOM05D010250 ORTHO05D015109 4.7e-09 64.3 73 43.8
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 4.7e-09 64.3 69 46.4
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 4.7e-09 64.3 77 41.6
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 77 36.4
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 8.0e-09 63.5 69 43.5
Lj3C215T4 Lonicera japonica HOM05D000005 ORTHO05D000239 1.0e-08 63.2 49 59.2
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-08 63.2 77 40.3
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-08 62.4 68 47.1
Eucgr.H03761 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.1e-08 61.6 77 36.4
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.1e-08 61.6 77 37.7
Eucgr.L01088 Eucalyptus grandis HOM05D000005 ORTHO05D035199 3.1e-08 61.6 73 34.2
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-08 61.6 69 40.6
Lj3P419T28 Lonicera japonica HOM05D010250 ORTHO05D015109 6.8e-08 60.5 75 41.3
Lj3P475T23 Lonicera japonica HOM05D010250 ORTHO05D015109 6.8e-08 60.5 75 41.3
PGR042G3770 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-08 60.5 73 39.7
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 6.8e-08 60.5 69 43.5
Eucgr.B01839 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-07 59.7 75 44.0
Eucgr.A00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-07 59.3 77 36.4
Eucgr.C01928 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-07 59.3 76 36.8
Eucgr.C02108 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-07 59.3 93 33.3
Eucgr.F02533 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-07 59.3 75 40.0
PGR102G0526 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-07 58.5 77 36.4
Eucgr.C02558 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.4e-07 58.2 75 44.0
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.4e-07 58.2 77 39.0
MD10G1007300 Malus domestica HOM05D000005 ORTHO05D000012 3.4e-07 58.2 75 36.0
Potri.013G037599 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.4e-07 58.2 76 35.5
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 3.4e-07 58.2 75 38.7
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 57.8 77 35.1
PGR142G2372 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 57.8 73 39.7
HanXRQChr15g0465971 Helianthus annuus HOM05D000005 ORTHO05D000012 5.8e-07 57.4 78 32.1
Nn1g09534 Nelumbo nucifera HOM05D000005 ORTHO05D000012 5.8e-07 57.4 76 36.8
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 5.8e-07 57.4 69 37.7
Eucgr.C01430 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.5e-07 57.0 71 43.7
Eucgr.C02570 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.5e-07 57.0 75 40.0
HanXRQChr16g0521501 Helianthus annuus HOM05D000005 ORTHO05D000012 7.5e-07 57.0 73 34.2
Potri.T002400 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.5e-07 57.0 76 31.6
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 7.5e-07 57.0 84 38.1
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 7.5e-07 57.0 76 38.2
SEGI_14433 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.5e-07 57.0 79 39.2
Duzib268G1757 Durio zibethinus HOM05D000005 ORTHO05D000012 9.8e-07 56.6 76 31.6
Eucgr.D02396 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 71 45.1
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.8e-07 56.6 77 39.0
Eucgr.H03746 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 56.2 77 33.8
PGR102G0368 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-06 56.2 75 38.7
CiPaw.09G115000 Carya illinoinensis HOM05D000005 ORTHO05D000012 1.7e-06 55.8 74 36.5
Eucgr.H03735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-06 55.8 77 35.1
PGR142G2344 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-06 55.8 77 36.4
Eucgr.E01804 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-06 55.5 68 38.2
Eucgr.E03125 Eucalyptus grandis HOM05D000005 ORTHO05D192871 2.2e-06 55.5 75 37.3
HanXRQChr09g0239701 Helianthus annuus HOM05D000005 ORTHO05D000012 2.2e-06 55.5 76 30.3
Nn1g01979 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.2e-06 55.5 76 31.6
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-06 55.5 75 36.0
Eucgr.H03694 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.9e-06 55.1 66 39.4
Eucgr.K01937 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.9e-06 55.1 72 34.7
HanXRQChr16g0522521 Helianthus annuus HOM05D000005 ORTHO05D000012 2.9e-06 55.1 73 32.9
Lj1C229G2 Lonicera japonica HOM05D000005 ORTHO05D017002 2.9e-06 55.1 38 65.8
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 3.7e-06 54.7 76 30.3
CiPaw.09G115200 Carya illinoinensis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 74 36.5
Eucgr.C02718 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 68 41.2
Eucgr.E01866 Eucalyptus grandis HOM05D000005 ORTHO05D011898 3.7e-06 54.7 68 36.8
Eucgr.H03745 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 54.7 77 33.8
Potri.003G014200 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.7e-06 54.7 76 31.6
Potri.T002066 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.7e-06 54.7 76 31.6
PGR042G1043 Punica granatum HOM05D000005 ORTHO05D000012 3.7e-06 54.7 73 38.4
HanXRQChr04g0098511 Helianthus annuus HOM05D000005 ORTHO05D000012 4.9e-06 54.3 75 29.3
Lsat_1_v5_gn_6_74641 Lactuca sativa HOM05D000005 ORTHO05D000012 4.9e-06 54.3 76 32.9
Potri.019G017082 Populus trichocarpa HOM05D000005 ORTHO05D000012 4.9e-06 54.3 76 31.6
Potri.019G019053 Populus trichocarpa HOM05D000005 ORTHO05D000012 4.9e-06 54.3 76 31.6
PGR044G2177 Punica granatum HOM05D000005 ORTHO05D011898 4.9e-06 54.3 76 40.8
Eucgr.C02654 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 74 37.8
Eucgr.E01803 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 68 36.8
Eucgr.H03699 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 77 33.8
Eucgr.H03723 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 77 33.8
Eucgr.H03785 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 77 33.8
Eucgr.J01332 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 77 35.1
Potri.019G016425 Populus trichocarpa HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 31.6
Potri.T002200 Populus trichocarpa HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 30.3
Sopen07g028980 Solanum pennellii HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 30.3
PGSC0003DMG402018257 Solanum tuberosum HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 27.6
TWI36G1442 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 6.4e-06 53.9 76 34.2
Eucgr.G00368 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 70 42.9
Eucgr.L00700 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.3e-06 53.5 75 40.0
HanXRQChr09g0240471 Helianthus annuus HOM05D000005 ORTHO05D000012 8.3e-06 53.5 73 34.2
Lsat_1_v5_gn_8_82140 Lactuca sativa HOM05D000005 ORTHO05D000012 8.3e-06 53.5 77 29.9
Lsat_1_v5_gn_9_90700 Lactuca sativa HOM05D000005 ORTHO05D000012 8.3e-06 53.5 73 30.1
MD10G1006800 Malus domestica HOM05D000005 ORTHO05D000012 8.3e-06 53.5 75 33.3
PGR142G2685 Punica granatum HOM05D000005 ORTHO05D000012 8.3e-06 53.5 73 38.4
Sopen01g045240 Solanum pennellii HOM05D000005 ORTHO05D000012 8.3e-06 53.5 76 27.6


User provided reference genes

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