Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-46 188.0 87 100.0
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-41 171.4 86 93.0
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-40 168.3 86 91.9
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-40 167.5 86 91.9
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 6.4e-39 163.7 86 90.7
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 6.4e-39 163.7 86 90.7
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-38 161.8 86 87.2
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-38 161.8 86 88.4
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-38 161.0 86 87.2
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-38 161.0 86 88.4
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 7.0e-38 160.2 86 87.2
Lj2P438T31 Lonicera japonica HOM05D008126 ORTHO05D000309 8.6e-36 153.3 86 83.7
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 9.5e-35 149.8 86 82.6
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-33 145.2 86 79.1
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-33 145.2 86 77.9
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 6.8e-33 143.7 86 77.9
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 6.8e-33 143.7 86 77.9
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-32 142.9 86 77.9
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-32 141.7 86 76.7
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.4e-32 141.4 86 76.7
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 7.5e-32 140.2 86 76.7
Lj3P1030T42 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-31 138.3 76 82.9
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-31 138.3 86 75.6
Lj5P369T29 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-30 134.8 86 74.4
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 9.2e-30 133.3 86 72.1
Lj2P1035T33 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-29 131.3 86 72.1
Lj1P842T49 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-29 131.0 86 72.1
Lj9P530T13 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-28 128.6 86 68.6
Lj4P899T22 Lonicera japonica HOM05D008126 ORTHO05D000309 4.3e-27 124.4 79 70.9
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 9.5e-27 123.2 86 67.4
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-26 122.1 86 66.3
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 2.8e-26 121.7 68 77.9
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 2.8e-26 121.7 86 65.1
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-26 120.2 86 65.1
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-25 118.2 86 65.1
Lj1P817T17 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-24 115.2 87 62.1
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-24 115.2 86 66.3
Lj9P465T64 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-24 115.2 87 62.1
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 5.8e-24 114.0 86 61.6
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 9.9e-24 113.2 86 60.5
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-23 112.5 86 59.3
Lj5P17T12 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-23 112.1 68 73.5
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 4.9e-23 110.9 85 64.7
Lj9P461T43 Lonicera japonica HOM05D008126 ORTHO05D000309 8.3e-23 110.2 86 59.3
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-22 108.2 86 59.3
Lj1P1225T25 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-22 107.8 77 63.6
Lj4P611T23 Lonicera japonica HOM05D008126 ORTHO05D000309 9.2e-22 106.7 86 58.1
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-21 104.0 86 59.3
Lj7P342T47 Lonicera japonica HOM05D008126 ORTHO05D000309 3.0e-20 101.7 86 58.1
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 3.9e-20 101.3 82 59.8
Lj5P258T10 Lonicera japonica HOM05D008126 ORTHO05D000309 5.6e-19 97.4 80 61.2
Lj2P661T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.6e-18 94.7 65 60.0
Lj2P359T36 Lonicera japonica HOM05D008126 ORTHO05D000309 8.9e-17 90.1 87 54.0
Lj8P617T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-16 89.7 61 60.7
Lj6P361T6 Lonicera japonica HOM05D008126 ORTHO05D000309 5.8e-16 87.4 62 58.1
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-14 82.8 83 53.0
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 9.0e-09 63.5 89 39.3
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 1.2e-08 63.2 71 38.0
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 3.4e-08 61.6 43 58.1
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 5.8e-08 60.8 73 39.7
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.6e-08 60.5 72 43.1
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.6e-08 60.5 80 40.0
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 7.6e-08 60.5 55 52.7
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 7.6e-08 60.5 41 61.0
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 7.6e-08 60.5 49 51.0
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 9.9e-08 60.1 55 49.1
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 9.9e-08 60.1 55 49.1
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 9.9e-08 60.1 51 54.9
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-07 59.7 55 47.3
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-07 59.7 49 57.1
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-07 59.3 82 39.0
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-07 59.3 73 46.6
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-07 59.3 80 40.0
PGSC0003DMG400023197 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.2e-07 58.9 82 30.5
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 2.9e-07 58.5 42 54.8
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.9e-07 58.5 55 52.7
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 2.9e-07 58.5 42 54.8
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 3.8e-07 58.2 79 40.5
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 4.9e-07 57.8 55 47.3
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.9e-07 57.8 74 44.6
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 4.9e-07 57.8 52 50.0
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 6.4e-07 57.4 55 47.3
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 6.4e-07 57.4 60 43.3
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 6.4e-07 57.4 58 48.3
Peaxi162Scf00052g00714 Petunia axillaris HOM05D004040 ORTHO05D000309 6.4e-07 57.4 43 53.5
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 8.4e-07 57.0 43 53.5
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 8.4e-07 57.0 60 43.3
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 8.4e-07 57.0 60 43.3
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 8.4e-07 57.0 60 43.3
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 1.1e-06 56.6 42 52.4
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-06 56.2 52 42.3
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 1.4e-06 56.2 82 35.4
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-06 56.2 41 58.5
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-06 56.2 60 43.3
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-06 56.2 60 43.3
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 1.9e-06 55.8 43 53.5
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-06 55.8 55 47.3
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-06 55.8 66 42.4
Peaxi162Scf00002g02917 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 55.8 49 53.1
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 55.8 55 47.3
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 55.8 55 50.9
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 55.8 49 55.1
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 1.9e-06 55.8 60 41.7
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.9e-06 55.8 61 37.7
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 2.4e-06 55.5 92 35.9
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 2.4e-06 55.5 82 35.4
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 2.4e-06 55.5 92 35.9
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.4e-06 55.5 77 42.9
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 2.4e-06 55.5 55 49.1
Peaxi162Scf00090g00816 Petunia axillaris HOM05D004040 ORTHO05D000309 2.4e-06 55.5 43 51.2
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 2.4e-06 55.5 51 45.1
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 55.5 55 49.1
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 55.5 56 46.4
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 55.5 56 46.4
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 3.2e-06 55.1 62 43.5
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 3.2e-06 55.1 67 34.3
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 3.2e-06 55.1 55 45.5
CAN.G165.9 Capsicum annuum HOM05D008741 ORTHO05D010787 3.2e-06 55.1 58 37.9
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-06 55.1 78 46.2
Peaxi162Scf00006g00328 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-06 55.1 37 62.2
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 3.2e-06 55.1 42 52.4
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 3.2e-06 55.1 60 43.3
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 4.2e-06 54.7 68 39.7
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-06 54.7 60 40.0
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 4.2e-06 54.7 60 40.0
COL.COLO4_35283 Corchorus olitorius HOM05D023691 ORTHO05D000309 4.2e-06 54.7 57 43.9
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 4.2e-06 54.7 55 49.1
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 4.2e-06 54.7 43 51.2
SalBow8G1086 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.2e-06 54.7 72 34.7
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.4e-06 54.3 91 37.4
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.4e-06 54.3 74 41.9
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.4e-06 54.3 83 37.3
Peaxi162Scf00070g00024 Petunia axillaris HOM05D004040 ORTHO05D000309 5.4e-06 54.3 69 36.2
Peaxi162Scf00099g01610 Petunia axillaris HOM05D004040 ORTHO05D000309 5.4e-06 54.3 69 36.2
Peaxi162Scf00100g00020 Petunia axillaris HOM05D004040 ORTHO05D000309 5.4e-06 54.3 69 36.2
Peaxi162Scf00594g00013 Petunia axillaris HOM05D004040 ORTHO05D000309 5.4e-06 54.3 69 36.2
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 5.4e-06 54.3 61 44.3
Peaxi162Scf01303g00011 Petunia axillaris HOM05D004040 ORTHO05D000309 5.4e-06 54.3 69 36.2
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 5.4e-06 54.3 58 37.9
EL10Ac5g12256 Beta vulgaris HOM05D008388 ORTHO05D000309 7.1e-06 53.9 44 52.3
EL10Ac9g22366 Beta vulgaris HOM05D008388 ORTHO05D000309 7.1e-06 53.9 44 52.3
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-06 53.9 85 34.1
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-06 53.9 85 34.1
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-06 53.9 85 34.1
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.1e-06 53.9 49 53.1
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.1e-06 53.9 75 42.7
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.1e-06 53.9 49 53.1
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.1e-06 53.9 49 53.1
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.1e-06 53.9 60 40.0
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.1e-06 53.9 55 50.9
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 7.1e-06 53.9 56 42.9
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.1e-06 53.9 81 35.8
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-06 53.5 58 39.7
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 9.3e-06 53.5 77 35.1
CAN.G433.7 Capsicum annuum HOM05D008741 ORTHO05D010787 9.3e-06 53.5 49 42.9
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 9.3e-06 53.5 57 36.8
MELO3C018497.2 Cucumis melo HOM05D010572 ORTHO05D012753 9.3e-06 53.5 66 33.3
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 9.3e-06 53.5 72 43.1
DCAR_017403 Daucus carota HOM05D027571 ORTHO05D000309 9.3e-06 53.5 74 37.8
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.3e-06 53.5 90 37.8
Peaxi162Scf00050g02421 Petunia axillaris HOM05D004040 ORTHO05D000309 9.3e-06 53.5 67 35.8
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-06 53.5 61 42.6
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-06 53.5 61 42.6
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-06 53.5 61 42.6
Peaxi162Scf00897g00038 Petunia axillaris HOM05D004040 ORTHO05D000309 9.3e-06 53.5 43 51.2
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 9.3e-06 53.5 61 42.6
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 9.3e-06 53.5 68 35.3
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 9.3e-06 53.5 53 50.9


User provided reference genes

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