Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 6.9e-47 190.3 94 100.0
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 2.5e-41 171.8 89 92.1
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 5.6e-41 170.6 89 91.0
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 1.3e-40 169.5 89 92.1
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 3.6e-40 167.9 89 91.0
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 3.6e-40 167.9 90 88.9
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 4.8e-40 167.5 89 89.9
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 6.2e-40 167.2 89 89.9
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 1.1e-39 166.4 89 87.6
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 1.8e-39 165.6 89 89.9
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 1.8e-39 165.6 88 90.9
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.8e-39 165.6 89 87.6
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 4.0e-39 164.5 87 88.5
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 4.0e-39 164.5 89 88.8
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 4.0e-39 164.5 89 88.8
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 4.0e-39 164.5 89 87.6
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 6.9e-39 163.7 89 87.6
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 6.9e-39 163.7 89 87.6
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 9.0e-39 163.3 87 89.7
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 9.0e-39 163.3 89 87.6
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 9.0e-39 163.3 89 88.8
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 9.0e-39 163.3 89 85.4
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 1.2e-38 162.9 89 85.4
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 1.2e-38 162.9 89 86.5
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 2.0e-38 162.2 89 85.4
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 2.0e-38 162.2 89 85.4
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 2.6e-38 161.8 89 87.6
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 3.4e-38 161.4 89 84.3
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 3.4e-38 161.4 88 88.6
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 3.4e-38 161.4 88 88.6
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 3.4e-38 161.4 89 84.3
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 4.5e-38 161.0 89 85.4
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 4.5e-38 161.0 88 88.6
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 5.8e-38 160.6 88 85.2
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 5.8e-38 160.6 89 85.4
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 5.8e-38 160.6 88 85.2
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 5.8e-38 160.6 89 85.4
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 5.8e-38 160.6 89 85.4
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 7.6e-38 160.2 87 86.2
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 7.6e-38 160.2 89 85.4
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 7.6e-38 160.2 89 85.4
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 7.6e-38 160.2 89 84.3
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 9.9e-38 159.8 89 85.4
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 9.9e-38 159.8 89 83.1
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 9.9e-38 159.8 89 82.0
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 1.3e-37 159.5 89 85.4
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.3e-37 159.5 89 83.1
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 1.7e-37 159.1 89 84.3
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.7e-37 159.1 89 84.3
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 1.7e-37 159.1 89 83.1
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 1.7e-37 159.1 87 86.2
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 2.2e-37 158.7 89 83.1
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.2e-37 158.7 89 80.9
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.2e-37 158.7 89 80.9
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 2.9e-37 158.3 89 82.0
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 2.9e-37 158.3 87 85.1
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 2.9e-37 158.3 89 84.3
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 3.8e-37 157.9 89 83.1
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.8e-37 157.9 87 85.1
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.8e-37 157.9 87 85.1
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 3.8e-37 157.9 89 83.1
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 4.9e-37 157.5 89 84.3
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 4.9e-37 157.5 89 82.0
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 6.4e-37 157.1 89 82.0
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 6.4e-37 157.1 89 85.4
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 6.4e-37 157.1 89 85.4
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 8.4e-37 156.8 89 82.0
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 8.4e-37 156.8 89 83.1
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 8.4e-37 156.8 89 83.1
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.1e-36 156.4 89 82.0
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 1.1e-36 156.4 89 82.0
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 1.4e-36 156.0 89 80.9
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 1.9e-36 155.6 89 80.9
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.9e-36 155.6 88 84.1
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 1.9e-36 155.6 89 80.9
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 1.9e-36 155.6 89 83.1
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 1.9e-36 155.6 89 80.9
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 1.9e-36 155.6 89 80.9
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 2.4e-36 155.2 89 80.9
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.4e-36 155.2 89 84.3
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 80.9
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 78.7
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 78.7
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 78.7
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 78.7
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 79.8
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 4.2e-36 154.5 84 86.9
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 4.2e-36 154.5 89 80.9
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 5.4e-36 154.1 89 78.7
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 5.4e-36 154.1 89 78.7
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 5.4e-36 154.1 89 80.9
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 9.3e-36 153.3 89 78.7
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 1.2e-35 152.9 87 80.5
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 1.2e-35 152.9 89 79.8
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.6e-35 152.5 89 82.0
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 2.7e-35 151.8 89 77.5
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 4.6e-35 151.0 89 77.5
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 4.6e-35 151.0 89 77.5
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 4.6e-35 151.0 87 82.8
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 6.0e-35 150.6 87 80.5
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 1.8e-34 149.1 88 80.7
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 1.8e-34 149.1 87 80.5
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 1.8e-34 149.1 89 80.9
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 2.3e-34 148.7 87 79.3
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 3.9e-34 147.9 87 79.3
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 8.7e-34 146.7 91 78.0
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 8.7e-34 146.7 89 74.2
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 1.1e-33 146.4 87 78.2
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 1.9e-33 145.6 87 78.2
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 2.5e-33 145.2 87 79.3
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 4.3e-33 144.4 88 76.1
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 9.6e-33 143.3 88 75.0
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 2.8e-32 141.7 89 75.3
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 3.7e-32 141.4 87 77.0
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 8.1e-32 140.2 89 74.2
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 4.5e-30 134.4 78 80.8
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 2.2e-29 132.1 87 72.4
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 3.8e-29 131.3 87 72.4
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 1.4e-28 129.4 87 71.3
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 2.7e-27 125.2 89 66.3
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 7.9e-27 123.6 92 62.0
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 3.9e-26 121.3 79 70.9
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 3.9e-26 121.3 87 66.7
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 5.1e-26 120.9 88 61.4
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 6.7e-26 120.6 78 71.8
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 3.3e-25 118.2 89 58.4
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.6e-22 108.6 89 58.4
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 6.5e-21 104.0 83 57.8
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 1.6e-19 99.4 85 52.9
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.1e-17 93.2 83 50.6
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 7.2e-12 73.9 93 39.8
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 1.1e-09 66.6 71 45.1
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 6.3e-08 60.8 89 36.0


User provided reference genes

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