Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P621T34 Lonicera japonica HOM05D000574 ORTHO05D003995 1.7e-76 289.3 147 100.0
Lj9A730T53 Lonicera japonica HOM05D000574 ORTHO05D003995 3.6e-58 228.4 132 90.2
Oeu043527.1 Olea europaea HOM05D000574 ORTHO05D003995 7.5e-32 141.0 138 53.6
Lj7C469T6 Lonicera japonica HOM05D000574 ORTHO05D003995 3.7e-31 138.7 155 54.2
Dinv41294 Davidia involucrata HOM05D000574 ORTHO05D003995 1.4e-30 136.7 146 54.1
Actinidia24023 Actinidia chinensis HOM05D000574 ORTHO05D003995 7.7e-29 131.0 144 54.2
Dinv42768 Davidia involucrata HOM05D000574 ORTHO05D003995 1.0e-28 130.6 146 51.4
Dinv43335 Davidia involucrata HOM05D000574 ORTHO05D003995 1.0e-28 130.6 146 51.4
CSS0007446 Camellia sinensis var. sinensis HOM05D000574 ORTHO05D003995 1.3e-28 130.2 138 50.7
Actinidia04113 Actinidia chinensis HOM05D000574 ORTHO05D003995 3.8e-28 128.6 141 53.2
Actinidia33314 Actinidia chinensis HOM05D000574 ORTHO05D003995 9.4e-27 124.0 140 53.6
MSTRG.10724 Avicennia marina HOM05D000574 ORTHO05D003995 2.1e-26 122.9 138 49.3
Rhsim01G0009600 Rhododendron simsii HOM05D000574 ORTHO05D003995 2.7e-26 122.5 146 49.3
Prupe.1G095200 Prunus persica HOM05D000574 ORTHO05D003995 3.6e-26 122.1 139 48.2
MSTRG.6184 Avicennia marina HOM05D000574 ORTHO05D003995 1.0e-25 120.6 143 48.3
Peaxi162Scf00457g00017 Petunia axillaris HOM05D000574 ORTHO05D003995 1.0e-25 120.6 137 46.0
Cfa013537 Carpinus fangiana HOM05D000574 ORTHO05D003995 1.4e-25 120.2 136 50.0
MSTRG.26238 Avicennia marina HOM05D000574 ORTHO05D003995 1.8e-25 119.8 141 49.6
Cc06_g13800 Coffea canephora HOM05D000574 ORTHO05D003995 2.3e-25 119.4 140 51.4
ECA234G0558 Erigeron canadensis HOM05D000574 ORTHO05D003995 3.0e-25 119.0 130 53.1
Peaxi162Scf00297g00107 Petunia axillaris HOM05D000574 ORTHO05D003995 4.0e-25 118.6 138 48.6
CiPaw.07G187600 Carya illinoinensis HOM05D000574 ORTHO05D003995 6.8e-25 117.9 143 47.6
FAN07G0707 Fragaria x ananassa HOM05D000574 ORTHO05D003995 8.8e-25 117.5 139 46.0
vmacro13084 Vaccinium macrocarpon HOM05D000574 ORTHO05D003995 8.8e-25 117.5 148 48.6
CiPaw.08G039300 Carya illinoinensis HOM05D000574 ORTHO05D003995 1.2e-24 117.1 145 45.5
FAN12G3442 Fragaria x ananassa HOM05D000574 ORTHO05D003995 1.2e-24 117.1 139 45.3
Haze_22152 Corylus avellana HOM05D000574 ORTHO05D003995 1.5e-24 116.7 137 49.6
FAN17G1427 Fragaria x ananassa HOM05D000574 ORTHO05D003995 1.5e-24 116.7 139 46.0
Hma1.2p1_0921F.1_g236690 Hydrangea macrophylla HOM05D000574 ORTHO05D003995 1.5e-24 116.7 145 49.0
SalBow1G2615 Salvia bowleyana HOM05D000574 ORTHO05D003995 1.5e-24 116.7 150 48.0
Manes.06G026400 Manihot esculenta HOM05D000574 ORTHO05D003995 2.0e-24 116.3 145 44.8
Oeu052238.1 Olea europaea HOM05D000574 ORTHO05D003995 2.0e-24 116.3 142 50.0
DCAR_014715 Daucus carota HOM05D000574 ORTHO05D003995 2.6e-24 115.9 136 50.7
FAN12G1668 Fragaria x ananassa HOM05D000574 ORTHO05D003995 3.4e-24 115.5 139 44.6
PGSC0003DMG400027472 Solanum tuberosum HOM05D000574 ORTHO05D003995 3.4e-24 115.5 136 44.9
Nitab4.5_0001212g0020 Nicotiana tabacum HOM05D000574 ORTHO05D003995 4.4e-24 115.2 136 44.9
Gohir.D05G007300 Gossypium hirsutum HOM05D000574 ORTHO05D003995 5.7e-24 114.8 143 45.5
MD13G1261900 Malus domestica HOM05D000574 ORTHO05D003995 5.7e-24 114.8 139 48.9
Thecc.09G163400 Theobroma cacao HOM05D000574 ORTHO05D003995 5.7e-24 114.8 142 45.8
RcHm_v2.0_Chr4g0404601 Rosa chinensis HOM05D000574 ORTHO05D003995 7.5e-24 114.4 138 46.4
Duzib150G0718 Durio zibethinus HOM05D000574 ORTHO05D003995 9.8e-24 114.0 142 44.4
Nitab4.5_0000244g0070 Nicotiana tabacum HOM05D000574 ORTHO05D003995 1.3e-23 113.6 136 44.9
CAN.G584.38 Capsicum annuum HOM05D000574 ORTHO05D003995 1.7e-23 113.2 136 44.9
COL.COLO4_16072 Corchorus olitorius HOM05D000574 ORTHO05D003995 1.7e-23 113.2 142 46.5
Gorai.009G007400 Gossypium raimondii HOM05D000574 ORTHO05D003995 1.7e-23 113.2 143 45.5
HanXRQChr10g0307521 Helianthus annuus HOM05D000574 ORTHO05D003995 1.7e-23 113.2 135 48.1
Migut.J01436 Erythranthe guttata HOM05D000574 ORTHO05D003995 2.2e-23 112.8 142 50.0
FvH4_4g09820 Fragaria vesca HOM05D000574 ORTHO05D003995 2.2e-23 112.8 139 43.9
Gohir.A05G006400 Gossypium hirsutum HOM05D000574 ORTHO05D003995 2.2e-23 112.8 143 45.5
Lalb_Chr12g0199121 Lupinus albus HOM05D000574 ORTHO05D003995 2.8e-23 112.5 135 48.1
Sopen07g002620 Solanum pennellii HOM05D000574 ORTHO05D003995 2.8e-23 112.5 136 44.9
Atru.chr7.551 Acer truncatum HOM05D000574 ORTHO05D003995 3.7e-23 112.1 152 44.1
DCAR_017947 Daucus carota HOM05D000574 ORTHO05D003995 3.7e-23 112.1 138 48.6
FAN22G0154 Fragaria x ananassa HOM05D000574 ORTHO05D003995 3.7e-23 112.1 139 44.6
QL02p096073 Quercus lobata HOM05D000574 ORTHO05D003995 3.7e-23 112.1 146 45.2
Solyc07g006540.3 Solanum lycopersicum HOM05D000574 ORTHO05D003995 4.8e-23 111.7 136 44.1
GSVIVG01032247001 Vitis vinifera HOM05D000574 ORTHO05D003995 6.3e-23 111.3 136 45.6
HanXRQChr12g0358051 Helianthus annuus HOM05D000574 ORTHO05D003995 1.8e-22 109.8 133 49.6
Manes.14G147300 Manihot esculenta HOM05D000574 ORTHO05D003995 1.8e-22 109.8 145 41.4
Duzib168G1018 Durio zibethinus HOM05D000574 ORTHO05D003995 4.1e-22 108.6 142 45.1
Sabra06G0134000 Salix brachista HOM05D000574 ORTHO05D003995 4.1e-22 108.6 142 44.4
MD16G1264200 Malus domestica HOM05D000574 ORTHO05D003995 5.4e-22 108.2 139 46.0
ClCG06G012950 Citrullus lanatus HOM05D000574 ORTHO05D003995 7.0e-22 107.8 141 42.6
Ciclev10007320m.g Citrus clementina HOM05D000574 ORTHO05D003995 7.0e-22 107.8 146 43.8
Psat4g010720 Pisum sativum HOM05D000574 ORTHO05D003995 7.0e-22 107.8 132 45.5
Medtr4g129230 Medicago truncatula HOM05D000574 ORTHO05D003995 9.1e-22 107.5 134 45.5
Hund26393 Selenicereus undatus HOM05D000574 ORTHO05D003995 1.2e-21 107.1 144 45.1
Hund08999 Selenicereus undatus HOM05D000574 ORTHO05D003995 1.6e-21 106.7 137 42.3
Lalb_Chr07g0180151 Lupinus albus HOM05D000574 ORTHO05D003995 2.0e-21 106.3 135 47.4
Rhsim03G0262100 Rhododendron simsii HOM05D000574 ORTHO05D003995 2.7e-21 105.9 137 43.8
Gorai.004G272800 Gossypium raimondii HOM05D000574 ORTHO05D003995 3.5e-21 105.5 141 42.6
AUR62039978 Chenopodium quinoa HOM05D000574 ORTHO05D003995 4.5e-21 105.1 139 42.4
Sed0008184 Sechium edule HOM05D000574 ORTHO05D003995 4.5e-21 105.1 151 44.4
Sed0025040 Sechium edule HOM05D000574 ORTHO05D003995 4.5e-21 105.1 150 42.0
Gohir.D08G255500 Gossypium hirsutum HOM05D000574 ORTHO05D003995 5.9e-21 104.8 141 42.6
Potri.006G175200 Populus trichocarpa HOM05D000574 ORTHO05D003995 5.9e-21 104.8 145 42.1
Ah.09g229620 Amaranthus hybridus HOM05D000574 ORTHO05D003995 1.0e-20 104.0 142 39.4
MELO3C017514.2 Cucumis melo HOM05D000574 ORTHO05D003995 1.0e-20 104.0 143 44.1
Lsat_1_v5_gn_5_87280 Lactuca sativa HOM05D000574 ORTHO05D003995 1.0e-20 104.0 133 45.9
TPR.G5360 Trifolium pratense HOM05D000574 ORTHO05D003995 1.3e-20 103.6 130 45.4
AUR62040287 Chenopodium quinoa HOM05D000574 ORTHO05D003995 1.7e-20 103.2 139 41.7
Lj4g0009510 Lotus japonicus HOM05D000574 ORTHO05D003995 1.7e-20 103.2 140 45.0
Cpa.g.sc75.5 Carica papaya HOM05D000574 ORTHO05D003995 2.3e-20 102.8 144 40.3
ClCG11G012250 Citrullus lanatus HOM05D000574 ORTHO05D003995 2.9e-20 102.4 151 41.1
CsaV3_1G029520 Cucumis sativus L. HOM05D000574 ORTHO05D003995 2.9e-20 102.4 143 44.1
Phvul.003G150300 Phaseolus vulgaris HOM05D000574 ORTHO05D003995 2.9e-20 102.4 134 44.8
Ah.14g084050 Amaranthus hybridus HOM05D000574 ORTHO05D003995 3.8e-20 102.1 133 41.4
EL10Ac8g18253 Beta vulgaris HOM05D000574 ORTHO05D003995 3.8e-20 102.1 142 43.7
Aqoxy7G03186 Aquilegia oxysepala HOM05D000574 ORTHO05D003995 5.0e-20 101.7 139 42.4
arahy.Tifrunner.gnm1.ann1.9BS001 Arachis hypogaea HOM05D000574 ORTHO05D003995 5.0e-20 101.7 139 44.6
arahy.Tifrunner.gnm1.ann1.J9PLIE Arachis hypogaea HOM05D000574 ORTHO05D003995 5.0e-20 101.7 139 44.6
Sc14g0001130 Simmondsia chinensis HOM05D000574 ORTHO05D003995 5.0e-20 101.7 132 43.2
TAR383G0803 Trochodendron aralioides HOM05D000574 ORTHO05D003995 5.0e-20 101.7 141 41.1
TWI32G0801 Tripterygium wilfordii HOM05D000574 ORTHO05D003995 6.6e-20 101.3 149 39.6
MELO3C004035.2 Cucumis melo HOM05D000574 ORTHO05D003995 8.6e-20 100.9 141 42.6
ECA240G3799 Erigeron canadensis HOM05D000574 ORTHO05D003995 8.6e-20 100.9 133 44.4
CsaV3_2G008310 Cucumis sativus L. HOM05D000574 ORTHO05D003995 3.3e-19 99.0 141 41.8
Glyma.13G092700 Glycine max HOM05D000574 ORTHO05D003995 3.3e-19 99.0 134 44.0
Sed0008408 Sechium edule HOM05D000574 ORTHO05D003995 4.2e-19 98.6 151 41.1
HanXRQChr12g0379781 Helianthus annuus HOM05D000574 ORTHO05D003995 7.2e-19 97.8 132 43.2
Oeu054242.1 Olea europaea HOM05D000574 ORTHO05D003995 7.2e-19 97.8 134 46.3
vmacro06037 Vaccinium macrocarpon HOM05D000574 ORTHO05D003995 7.2e-19 97.8 137 41.6
TAR625G0053 Trochodendron aralioides HOM05D000574 ORTHO05D003995 9.5e-19 97.4 137 45.3
TAR626G0730 Trochodendron aralioides HOM05D000574 ORTHO05D003995 9.5e-19 97.4 134 44.8
VMungo1215G0757 Vigna mungo HOM05D000574 ORTHO05D003995 1.2e-18 97.1 134 43.3
Glyma.17G067700 Glycine max HOM05D000574 ORTHO05D003995 2.8e-18 95.9 135 43.0
Potri.018G097300 Populus trichocarpa HOM05D000574 ORTHO05D003995 3.6e-18 95.5 145 40.0
Aa31LG3G13550 Aethionema arabicum HOM05D000574 ORTHO05D003995 4.7e-18 95.1 139 38.8
Migut.K00267 Erythranthe guttata HOM05D000574 ORTHO05D003995 6.1e-18 94.7 139 41.0
Sabra18G0084400 Salix brachista HOM05D000574 ORTHO05D003995 1.0e-17 94.0 142 40.1
Eucgr.C00199 Eucalyptus grandis HOM05D000574 ORTHO05D003995 1.8e-17 93.2 144 39.6
TWI34G1191 Tripterygium wilfordii HOM05D000574 ORTHO05D003995 1.2e-16 90.5 150 37.3
AL8G33750 Arabidopsis lyrata HOM05D000574 ORTHO05D003995 2.6e-16 89.4 139 37.4
MBI15_g39955_MAGBIO Magnolia biondii HOM05D000574 ORTHO05D003995 3.4e-16 89.0 143 39.9
Carub.0008s1822 Capsella rubella HOM05D000574 ORTHO05D003995 9.8e-16 87.4 139 36.7
Sp6g19400 Schrenkiella parvula HOM05D000574 ORTHO05D003995 9.8e-16 87.4 139 37.4
AT5G57710 Arabidopsis thaliana HOM05D000574 ORTHO05D003995 1.3e-15 87.0 139 36.0
A10p15100 Brassica napus HOM05D000574 ORTHO05D003995 1.7e-15 86.7 137 37.2
C09p49580 Brassica napus HOM05D000574 ORTHO05D003995 1.7e-15 86.7 137 37.2
CANSAT11G2168 Cannabis sativa HOM05D000574 ORTHO05D003995 1.7e-15 86.7 148 38.5
BcaB05g22369 Brassica carinata HOM05D000574 ORTHO05D003995 2.2e-15 86.3 139 38.8
BraA10t43593Z Brassica rapa HOM05D000574 ORTHO05D003995 2.2e-15 86.3 137 37.2
Lsat_1_v5_gn_7_53320 Lactuca sativa HOM05D000574 ORTHO05D003995 2.2e-15 86.3 129 42.6
MBI14_g24288_MAGBIO Magnolia biondii HOM05D000574 ORTHO05D003995 2.2e-15 86.3 146 39.0
BcaB08g36131 Brassica carinata HOM05D000574 ORTHO05D003995 4.9e-15 85.1 137 37.2
BcaC04g19934 Brassica carinata HOM05D000574 ORTHO05D003995 6.3e-15 84.7 137 36.5
BolC9t57813H Brassica oleracea HOM05D000574 ORTHO05D003995 6.3e-15 84.7 137 36.5
SGA_v2.0_scaffold718G53509 Striga asiatica HOM05D000574 ORTHO05D003995 6.3e-15 84.7 136 42.6
PSO170G2160 Papaver somniferum HOM05D000574 ORTHO05D003995 8.3e-15 84.3 139 39.6
Thhalv10012564m.g Eutrema salsugineum HOM05D000574 ORTHO05D003995 1.1e-14 84.0 140 38.6
Nn2g12603 Nelumbo nucifera HOM05D000574 ORTHO05D003995 1.8e-14 83.2 136 41.2
PSO017G5449 Papaver somniferum HOM05D000574 ORTHO05D003995 1.8e-14 83.2 138 37.0
PGR102G1772 Punica granatum HOM05D000574 ORTHO05D003995 2.4e-14 82.8 137 39.4
A02p08280 Brassica napus HOM05D000574 ORTHO05D003995 3.1e-14 82.4 139 37.4
BraA02t05900Z Brassica rapa HOM05D000574 ORTHO05D003995 3.1e-14 82.4 139 37.4
CARHR271460 Cardamine hirsuta HOM05D000574 ORTHO05D003995 4.1e-14 82.0 141 38.3
C02p13970 Brassica napus HOM05D000574 ORTHO05D003995 5.4e-14 81.6 139 36.7
BcaC03g14131 Brassica carinata HOM05D000574 ORTHO05D003995 2.0e-13 79.7 139 36.0
BolC2t07515H Brassica oleracea HOM05D000574 ORTHO05D003995 2.0e-13 79.7 139 36.0
CDE04G1186 Ceratophyllum demersum HOM05D000574 ORTHO05D003995 2.7e-13 79.3 140 35.7
SGA_v2.0_scaffold66G22508 Striga asiatica HOM05D000574 ORTHO05D003995 1.3e-12 77.0 136 39.0
SHI02990 Sapria himalayana HOM05D000574 ORTHO05D003995 5.0e-12 75.1 146 35.6
THA.LOC104811815 Tarenaya hassleriana HOM05D000574 ORTHO05D003995 1.1e-11 73.9 138 34.8
CDE02G0201 Ceratophyllum demersum HOM05D000574 ORTHO05D003995 3.3e-11 72.4 139 36.0
THA.LOC104804491 Tarenaya hassleriana HOM05D000574 ORTHO05D003995 9.5e-11 70.9 148 32.4
Aa31LG2G20180 Aethionema arabicum HOM05D000574 ORTHO05D003995 6.1e-10 68.2 128 32.0
Zm00001eb178400 Zea mays HOM05D000574 ORTHO05D003995 6.1e-10 68.2 138 34.1
GSVIVG01009853001 Vitis vinifera HOM05D000574 ORTHO05D000070 1.8e-09 66.6 123 34.1
Zm00001eb412800 Zea mays HOM05D000574 ORTHO05D003995 1.8e-09 66.6 138 32.6
SGA_v2.0_scaffold69G23288 Striga asiatica HOM05D000574 ORTHO05D003995 5.2e-09 65.1 134 33.6
Os08g0250900 Oryza sativa ssp. japonica HOM05D000574 ORTHO05D003995 2.0e-08 63.2 138 31.9
A01p07810 Brassica napus HOM05D000574 ORTHO05D003995 1.3e-07 60.5 126 30.2
CARHR238250 Cardamine hirsuta HOM05D000574 ORTHO05D003995 1.3e-07 60.5 132 29.5
BcaNung00541 Brassica carinata HOM05D000574 ORTHO05D003995 1.7e-07 60.1 116 31.9
Thhalv10024345m.g Eutrema salsugineum HOM05D000574 ORTHO05D003995 2.2e-07 59.7 130 29.2
Sp7g28220 Schrenkiella parvula HOM05D000574 ORTHO05D003995 2.9e-07 59.3 130 30.8
BcaC09g51822 Brassica carinata HOM05D000574 ORTHO05D003995 6.4e-07 58.2 126 29.4
C01p08710 Brassica napus HOM05D000574 ORTHO05D003995 6.4e-07 58.2 126 29.4
BolC1t00857H Brassica oleracea HOM05D000574 ORTHO05D003995 6.4e-07 58.2 126 29.4
HPP92_013472 Vanilla planifolia HOM05D000574 ORTHO05D003995 8.3e-07 57.8 143 31.5
AT4G30350 Arabidopsis thaliana HOM05D000574 ORTHO05D003995 1.1e-06 57.4 122 29.5
BraA01t00725Z Brassica rapa HOM05D000574 ORTHO05D003995 1.1e-06 57.4 126 28.6
BcaNung02996 Brassica carinata HOM05D000574 ORTHO05D003995 2.4e-06 56.2 126 28.6
BraA03t15031Z Brassica rapa HOM05D000574 ORTHO05D003995 3.2e-06 55.8 118 30.5
AL7G21800 Arabidopsis lyrata HOM05D000574 ORTHO05D003995 4.1e-06 55.5 122 29.5
A03p59770 Brassica napus HOM05D000574 ORTHO05D003995 7.0e-06 54.7 118 30.5
MD01G1153400 Malus domestica HOM05D000574 ORTHO05D002645 9.2e-06 54.3 136 31.6


User provided reference genes

Program Settings