Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P61T27 Lonicera japonica HOM05D000003 ORTHO05D000126 1.4e-40 169.1 80 100.0
Lj5A73T75 Lonicera japonica HOM05D000003 ORTHO05D000126 3.8e-22 107.8 79 62.0
Lj6P126T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.5e-18 95.9 78 51.3
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 1.5e-18 95.9 78 51.3
Lj7P520T7 Lonicera japonica HOM05D000003 ORTHO05D000126 2.0e-18 95.5 79 50.6
Lj1P222T20 Lonicera japonica HOM05D000003 ORTHO05D000126 3.3e-18 94.7 79 48.1
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 8.2e-17 90.1 79 50.6
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.4e-16 89.4 78 51.3
Lj5P90T9 Lonicera japonica HOM05D000003 ORTHO05D000126 4.1e-16 87.8 79 50.6
Lj8P674T6 Lonicera japonica HOM05D000003 ORTHO05D000126 4.1e-16 87.8 78 50.0
Lj4C700T0 Lonicera japonica HOM05D000003 ORTHO05D000126 1.2e-15 86.3 76 47.4
Lj9C2T0 Lonicera japonica HOM05D000003 ORTHO05D000126 2.0e-15 85.5 79 48.1
Lj4C411T6 Lonicera japonica HOM05D000003 ORTHO05D000126 5.9e-15 84.0 76 47.4
Lj7C413T9 Lonicera japonica HOM05D000003 ORTHO05D000126 1.0e-14 83.2 76 46.1
Lj4C408G4 Lonicera japonica HOM05D000003 ORTHO05D000126 1.7e-14 82.4 76 46.1
Lj8P336T24 Lonicera japonica HOM05D000003 ORTHO05D000126 5.0e-14 80.9 76 46.1
CANSAT35G1211 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-14 80.5 79 43.0
Lj3P765T7 Lonicera japonica HOM05D000003 ORTHO05D000126 6.5e-14 80.5 79 40.5
CANSAT01G1830 Cannabis sativa HOM05D000003 ORTHO05D000126 8.5e-14 80.1 79 43.0
Lj8C82T10 Lonicera japonica HOM05D000003 ORTHO05D000126 8.5e-14 80.1 79 40.5
Lj2C325T18 Lonicera japonica HOM05D000003 ORTHO05D000126 1.1e-13 79.7 78 41.0
CANSAT25G2375 Cannabis sativa HOM05D000003 ORTHO05D000126 1.9e-13 79.0 79 43.0
Lj1P1051T34 Lonicera japonica HOM05D000003 ORTHO05D000126 1.9e-13 79.0 77 45.5
Lj2P523T64 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-13 78.2 76 46.1
Lj5P270T37 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-13 78.2 76 47.4
CANSAT51G0005 Cannabis sativa HOM05D000003 ORTHO05D000126 7.2e-13 77.0 79 41.8
Lj5P457T10 Lonicera japonica HOM05D000003 ORTHO05D000126 7.2e-13 77.0 79 41.8
Lj7P706T33 Lonicera japonica HOM05D000003 ORTHO05D000126 9.4e-13 76.6 79 38.0
Lj3P316T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.2e-12 76.3 79 40.5
Nn4g22088 Nelumbo nucifera HOM05D000003 ORTHO05D000126 1.2e-12 76.3 79 41.8
CANSAT56G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 1.6e-12 75.9 79 41.8
Lj1C50T13 Lonicera japonica HOM05D000003 ORTHO05D000126 1.6e-12 75.9 74 45.9
CANSAT56G0528 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-12 75.5 79 41.8
CANSAT01G0704 Cannabis sativa HOM05D000003 ORTHO05D000126 2.7e-12 75.1 79 41.8
Lj2C538T6 Lonicera japonica HOM05D000003 ORTHO05D000126 2.7e-12 75.1 76 47.4
Lj9P297T34 Lonicera japonica HOM05D000003 ORTHO05D000126 2.7e-12 75.1 77 41.6
CANSAT01G2836 Cannabis sativa HOM05D000003 ORTHO05D000126 3.6e-12 74.7 79 40.5
Lju279P6T2 Lonicera japonica HOM05D000003 ORTHO05D000126 4.7e-12 74.3 79 40.5
Nn1g08272 Nelumbo nucifera HOM05D000003 ORTHO05D000126 4.7e-12 74.3 79 39.2
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-12 73.9 79 41.8
CANSAT25G1596 Cannabis sativa HOM05D000003 ORTHO05D000126 6.1e-12 73.9 79 40.5
Lj5P129T22 Lonicera japonica HOM05D000003 ORTHO05D000126 8.0e-12 73.6 79 41.8
CANSAT35G1890 Cannabis sativa HOM05D000003 ORTHO05D000126 1.0e-11 73.2 79 40.5
CANSAT54G2916 Cannabis sativa HOM05D000003 ORTHO05D000126 1.0e-11 73.2 79 40.5
CANSAT11G2125 Cannabis sativa HOM05D000003 ORTHO05D000126 1.4e-11 72.8 79 40.5
Lj2P1027T17 Lonicera japonica HOM05D000003 ORTHO05D000126 1.8e-11 72.4 79 36.7
Lj3P212T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.8e-11 72.4 78 39.7
CANSAT25G1444 Cannabis sativa HOM05D000003 ORTHO05D000126 5.2e-11 70.9 79 38.0
CANSAT56G1051 Cannabis sativa HOM05D000003 ORTHO05D000126 6.7e-11 70.5 79 40.5
CANSAT25G0749 Cannabis sativa HOM05D000003 ORTHO05D000126 8.8e-11 70.1 79 36.7
CANSAT25G1151 Cannabis sativa HOM05D000003 ORTHO05D000126 8.8e-11 70.1 79 36.7
CANSAT25G2355 Cannabis sativa HOM05D000003 ORTHO05D000126 8.8e-11 70.1 79 36.7
CANSAT56G2562 Cannabis sativa HOM05D000003 ORTHO05D000126 1.5e-10 69.3 79 34.2
Lj1P554T9 Lonicera japonica HOM05D000003 ORTHO05D000126 1.5e-10 69.3 78 33.3
CANSAT01G1699 Cannabis sativa HOM05D000003 ORTHO05D000126 2.0e-10 68.9 79 36.7
CANSAT56G2987 Cannabis sativa HOM05D000003 ORTHO05D000126 3.3e-10 68.2 79 32.9
Lj1P98T8 Lonicera japonica HOM05D000003 ORTHO05D000126 3.3e-10 68.2 76 39.5
Lj3P602T4 Lonicera japonica HOM05D000003 ORTHO05D000126 3.3e-10 68.2 79 40.5
CANSAT01G2193 Cannabis sativa HOM05D000003 ORTHO05D000126 4.4e-10 67.8 79 35.4
CANSAT80G1589 Cannabis sativa HOM05D000003 ORTHO05D000126 4.4e-10 67.8 79 34.2
CANSAT64G1035 Cannabis sativa HOM05D000003 ORTHO05D000126 5.7e-10 67.4 79 35.4
CANSAT64G1905 Cannabis sativa HOM05D000003 ORTHO05D000126 5.7e-10 67.4 79 36.7
CANSAT80G2209 Cannabis sativa HOM05D000003 ORTHO05D000126 5.7e-10 67.4 79 35.4
SHI39369 Sapria himalayana HOM05D000003 ORTHO05D000006 5.7e-10 67.4 79 39.2
CANSAT25G0594 Cannabis sativa HOM05D000003 ORTHO05D000126 9.7e-10 66.6 79 38.0
CANSAT35G1841 Cannabis sativa HOM05D000003 ORTHO05D000126 9.7e-10 66.6 79 36.7
Medtr0010s0350 Medicago truncatula HOM05D000003 ORTHO05D000126 9.7e-10 66.6 74 40.5
Medtr0010s0370 Medicago truncatula HOM05D000003 ORTHO05D000126 9.7e-10 66.6 74 40.5
CANSAT25G3681 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-09 66.2 79 35.4
CANSAT56G1157 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-09 66.2 79 38.0
CANSAT64G2526 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-09 66.2 79 34.2
CANSAT25G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-09 65.9 79 35.4
Lj1P292T8 Lonicera japonica HOM05D000003 ORTHO05D000126 1.7e-09 65.9 79 34.2
Lj3P603T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.7e-09 65.9 79 39.2
Lj7P127T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.7e-09 65.9 78 35.9
Manes.03G022751 Manihot esculenta HOM05D000003 ORTHO05D000004 1.7e-09 65.9 79 30.4
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.5 79 38.0
CANSAT11G0372 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.5 79 34.2
CANSAT35G1319 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.5 79 34.2
CANSAT56G0419 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.5 79 34.2
CANSAT56G2563 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.5 79 34.2
CANSAT01G2120 Cannabis sativa HOM05D000003 ORTHO05D000126 2.8e-09 65.1 79 34.2
CANSAT54G2152 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-09 65.1 79 34.2
CANSAT25G0383 Cannabis sativa HOM05D000003 ORTHO05D000126 3.7e-09 64.7 79 35.4
SHI08643 Sapria himalayana HOM05D000003 ORTHO05D000126 3.7e-09 64.7 77 39.0
CANSAT21G2271 Cannabis sativa HOM05D000003 ORTHO05D000126 6.3e-09 63.9 79 34.2
Lj9P463T30 Lonicera japonica HOM05D000003 ORTHO05D000126 8.2e-09 63.5 78 37.2
CANSAT11G0233 Cannabis sativa HOM05D000003 ORTHO05D000126 1.8e-08 62.4 79 34.2
CANSAT21G1411 Cannabis sativa HOM05D000003 ORTHO05D000126 1.8e-08 62.4 79 32.9
CANSAT56G1788 Cannabis sativa HOM05D000003 ORTHO05D000126 1.8e-08 62.4 79 31.6
Lj5P52T12 Lonicera japonica HOM05D000003 ORTHO05D000126 1.8e-08 62.4 71 38.0
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-08 62.0 79 32.9
CANSAT25G1688 Cannabis sativa HOM05D000003 ORTHO05D000126 2.4e-08 62.0 79 32.9
CANSAT64G0848 Cannabis sativa HOM05D000003 ORTHO05D000126 2.4e-08 62.0 79 34.2
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-08 62.0 79 35.4
Lj6P424T4 Lonicera japonica HOM05D000003 ORTHO05D000126 2.4e-08 62.0 78 34.6
CANSAT21G0764 Cannabis sativa HOM05D000003 ORTHO05D000126 3.1e-08 61.6 79 32.9
CANSAT25G2150 Cannabis sativa HOM05D000003 ORTHO05D000126 3.1e-08 61.6 79 31.6
SHI30882 Sapria himalayana HOM05D000003 ORTHO05D000126 3.1e-08 61.6 71 39.4
CANSAT01G0549 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-08 61.2 79 31.6
CANSAT80G0239 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-08 61.2 79 32.9
Lj4P365T6 Lonicera japonica HOM05D000003 ORTHO05D000126 4.1e-08 61.2 52 51.9
Lj6P432T2 Lonicera japonica HOM05D000003 ORTHO05D000126 4.1e-08 61.2 78 34.6
CANSAT11G0462 Cannabis sativa HOM05D000003 ORTHO05D000126 5.3e-08 60.8 79 32.9
CANSAT64G0727 Cannabis sativa HOM05D000003 ORTHO05D000126 5.3e-08 60.8 79 32.9
CANSAT80G1454 Cannabis sativa HOM05D000003 ORTHO05D000126 5.3e-08 60.8 79 34.2
CANSAT01G2714 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-08 60.5 79 32.9
CANSAT11G0488 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-08 60.5 79 30.4
CANSAT35G1400 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-08 60.5 79 35.4
CANSAT56G3060 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-08 60.5 79 34.2
Lj3P993T31 Lonicera japonica HOM05D000003 ORTHO05D000126 7.0e-08 60.5 79 35.4
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 7.0e-08 60.5 63 44.4
SHI06522 Sapria himalayana HOM05D000003 ORTHO05D000126 7.0e-08 60.5 73 41.1
TPR.G5809 Trifolium pratense HOM05D000003 ORTHO05D000126 7.0e-08 60.5 78 32.1
Lju225A2T37 Lonicera japonica HOM05D000003 ORTHO05D000126 9.1e-08 60.1 68 42.6
CANSAT21G0980 Cannabis sativa HOM05D000003 ORTHO05D000126 3.5e-07 58.2 79 30.4
CANSAT01G2613 Cannabis sativa HOM05D000003 ORTHO05D000126 5.9e-07 57.4 79 29.1
Lj1g0019290 Lotus japonicus HOM05D000003 ORTHO05D000126 5.9e-07 57.4 71 36.6
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 7.7e-07 57.0 79 30.4
CANSAT01G3270 Cannabis sativa HOM05D000003 ORTHO05D000126 7.7e-07 57.0 79 27.8
Nn6g35690 Nelumbo nucifera HOM05D000003 ORTHO05D000126 7.7e-07 57.0 58 44.8
TPR.G40617 Trifolium pratense HOM05D000003 ORTHO05D000126 7.7e-07 57.0 78 28.2
Nn8g41082 Nelumbo nucifera HOM05D000003 ORTHO05D000126 1.0e-06 56.6 60 41.7
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.3e-06 56.2 75 33.3
CANSAT01G1600 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.2 79 34.2
CANSAT11G0452 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.2 79 29.1
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 56.2 79 30.4
CANSAT80G0750 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.2 79 30.4
CANSAT54G0414 Cannabis sativa HOM05D000003 ORTHO05D000006 1.7e-06 55.8 78 30.8
CANSAT56G1743 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-06 55.8 79 31.6
CANSAT25G2776 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-06 55.5 79 30.4
Lj6P814T100 Lonicera japonica HOM05D000003 ORTHO05D000126 2.2e-06 55.5 39 51.3
Cpa.g.sc217.5 Carica papaya HOM05D002754 ORTHO05D003271 2.9e-06 55.1 71 31.0
Nn5g27256 Nelumbo nucifera HOM05D000003 ORTHO05D000126 2.9e-06 55.1 79 35.4
CANSAT54G2829 Cannabis sativa HOM05D000003 ORTHO05D000126 3.8e-06 54.7 79 32.9
CANSAT64G1968 Cannabis sativa HOM05D000003 ORTHO05D000126 3.8e-06 54.7 79 29.1
CANSAT56G1659 Cannabis sativa HOM05D000003 ORTHO05D000126 5.0e-06 54.3 79 30.4


User provided reference genes

Program Settings