Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P545T25 Lonicera japonica HOM05D057521 ORTHO05D025757 4.9e-44 180.6 84 100.0
Lj2P248T48 Lonicera japonica HOM05D000003 ORTHO05D020832 3.6e-15 84.7 77 48.1
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 1.7e-12 75.9 76 44.7
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 4.9e-12 74.3 63 49.2
Lj7C739T7 Lonicera japonica HOM05D000040 ORTHO05D001305 1.4e-11 72.8 59 45.8
Lju124P28T10 Lonicera japonica HOM05D057521 ORTHO05D025757 7.1e-11 70.5 51 56.9
Lj3P533T26 Lonicera japonica HOM05D021412 ORTHO05D025757 9.2e-11 70.1 68 42.6
Lj8P177T18 Lonicera japonica HOM05D014440 ORTHO05D000167 3.5e-10 68.2 81 37.0
Lj2C969T7 Lonicera japonica HOM05D000003 ORTHO05D000004 4.6e-10 67.8 62 43.5
Lj8C26T8 Lonicera japonica HOM05D000003 ORTHO05D000004 7.8e-10 67.0 56 44.6
Lj5C785T7 Lonicera japonica HOM05D008418 ORTHO05D000004 1.7e-09 65.9 73 34.2
Lj2P447T23 Lonicera japonica HOM05D014440 ORTHO05D000167 6.6e-09 63.9 71 38.0
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 1.1e-08 63.2 73 43.8
Lj7C747G6 Lonicera japonica HOM05D000003 ORTHO05D000004 2.5e-08 62.0 60 41.7
Lj3P442T6 Lonicera japonica HOM05D000003 ORTHO05D000004 4.3e-08 61.2 69 34.8
Lj5P109T70 Lonicera japonica HOM05D014440 ORTHO05D000167 5.6e-08 60.8 60 36.7
Lj5P296T4 Lonicera japonica HOM05D000003 ORTHO05D000004 5.6e-08 60.8 70 34.3
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 7.3e-08 60.5 76 39.5
Lj6P43T37 Lonicera japonica HOM05D000003 ORTHO05D000004 1.6e-07 59.3 69 33.3
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 2.1e-07 58.9 76 36.8
Lj2C311T5 Lonicera japonica HOM05D057088 ORTHO05D025757 3.6e-07 58.2 70 34.3
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 3.6e-07 58.2 73 35.6
Lj5C295T1 Lonicera japonica HOM05D014440 ORTHO05D000167 4.7e-07 57.8 62 37.1
Lj8P222T10 Lonicera japonica HOM05D014440 ORTHO05D000167 4.7e-07 57.8 51 41.2
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 4.7e-07 57.8 70 35.7
Lj7P99T38 Lonicera japonica HOM05D014440 ORTHO05D000167 1.1e-06 56.6 60 36.7
Lj3A64T8 Lonicera japonica HOM05D014440 ORTHO05D025757 1.8e-06 55.8 36 50.0
Solyc03g078170.1 Solanum lycopersicum HOM05D000003 ORTHO05D000167 1.8e-06 55.8 61 37.7
Medtr8g027950 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-06 55.1 59 40.7
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 5.2e-06 54.3 82 32.9
TPR.G24923 Trifolium pratense HOM05D000147 ORTHO05D004093 5.2e-06 54.3 75 29.3
Lj3P924T30 Lonicera japonica HOM05D021412 ORTHO05D000167 6.9e-06 53.9 68 41.2
Lj4P801T19 Lonicera japonica HOM05D000003 ORTHO05D000004 6.9e-06 53.9 79 29.1
Manes.17G011401 Manihot esculenta HOM05D000003 ORTHO05D000167 6.9e-06 53.9 65 36.9
Lj8C245T10 Lonicera japonica HOM05D000003 ORTHO05D000167 9.0e-06 53.5 67 37.3


User provided reference genes

Program Settings